RNA–Protein interactions for RNA: ENST00000370966.9

DEPDC1-201, Transcript of DEP domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1, Length 4,586 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-201ENST00000370966 TADA3O75528 432 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 FCER1AP12319 257 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 GCLMP48507 274 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 FMR1Q06787 632 aaKnown RBP eCLIP12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 STXBP2Q15833 593 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 TBC1D16Q8TBP0 767 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 RPF1Q9H9Y2 349 aaKnown RBP12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 HPS5Q9UPZ3 1129 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 DAGLAQ9Y4D2 1042 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 FAM205CA6NFA0 338 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 TBX3O15119 743 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 ANXA13P27216 316 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 ARL4AP40617 200 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 IREB2P48200 963 aaKnown RBP12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 LLGL1Q15334 1064 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 PDXDC1Q6P996 788 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 RSPH3Q86UC2 560 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 ERICH1Q86X53 443 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 MORC4Q8TE76 937 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 SSU72P8A0A1W2PR75 194 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 SRGNP10124 158 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 GABPAQ06546 454 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 SESTD1Q86VW0 696 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 TAB3Q8N5C8 712 aaPredicted RBP12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 ZNF526Q8TF50 670 aaPredicted RBP12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 PIM2Q9P1W9 311 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 TACC3Q9Y6A5 838 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 PFASO15067 1338 aa12.75□□□□□ -0.37
DEPDC1-201ENST00000370966 EXOC1LA0A1B0GW35 172 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CLGNO14967 610 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 VAMP7P51809 220 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CEP55Q53EZ4 464 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 ENOSF1Q7L5Y1 443 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 RASGRP2Q7LDG7 609 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 RBM41Q96IZ5 413 aaKnown RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 SNX25Q9H3E2 840 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 ACTR5Q9H9F9 607 aaPredicted RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 PFDN4Q9NQP4 134 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 ANAPC7Q9UJX3 599 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 FLT1P17948 1338 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CLDN3O15551 220 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 PRPSAP2O60256 369 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CD58P19256 250 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 MAP7Q14244 749 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 DRAP1Q14919 205 aaPredicted RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 ZNF667Q5HYK9 610 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 WDR24Q96S15 920 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 EIF2AK1Q9BQI3 630 aaKnown RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 TUFT1Q9NNX1 390 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 MORC2Q9Y6X9 1032 aaPredicted RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 AFF2P51816 1311 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 TARSL2A2RTX5 802 aaKnown RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 TJP3O95049 919 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 MAP2K2P36507 400 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 PSMC5P62195 406 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CENPUQ71F23 418 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 BANK1Q8NDB2 785 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 RNF146Q9NTX7 359 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 NYAP2Q9P242 653 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 ARHGAP42A6NI28 874 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 PFDN6O15212 129 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 BASP1P80723 227 aaKnown RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 PRPSAP1Q14558 356 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 NAA30Q147X3 362 aaPredicted RBP12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 RPS6KA2Q15349 733 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 MAPK6Q16659 721 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 KRT39Q6A163 491 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 OR6B2Q6IFH4 312 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 USP49Q70CQ1 688 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 KCTD6Q8NC69 237 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 NUF2Q9BZD4 464 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 SEPT10Q9P0V9 454 aa12.74□□□□□ -0.37
DEPDC1-201ENST00000370966 CPP00450 1065 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 MT-ND3P03897 115 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SRGAP2CP0DJJ0 459 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SLCO1A2P46721 670 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 CAV1Q03135 178 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 MTF1Q14872 753 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SNCBQ16143 134 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 C16orf86Q6ZW13 317 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 ZBTB33Q86T24 672 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 RUBCNQ92622 972 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 GJD4Q96KN9 370 aaPredicted RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 AP5M1Q9H0R1 490 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SLITRK6Q9H5Y7 841 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 ESYT2A0FGR8 921 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 ARHGEF37A1IGU5 675 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 TROAPQ12815 778 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 TMED2Q15363 201 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 DARS2Q6PI48 645 aaKnown RBP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 KCTD17Q8N5Z5 321 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 TTC13Q8NBP0 860 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 LXNQ9BS40 222 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 APOL6Q9BWW8 343 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 PLAAQ9Y263 795 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 SNX24Q9Y343 169 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 AFG3L2Q9Y4W6 797 aa12.73□□□□□ -0.37
DEPDC1-201ENST00000370966 CNTNAP5Q8WYK1 1306 aa12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms