RNA–Protein interactions for RNA: ENST00000370573.8

MCF2-202, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MCF2, Length 2,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-202ENST00000370573 CPLX3Q8WVH0 158 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 ESR2Q92731 530 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 PMM1Q92871 262 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 ZSCAN31Q96LW9 406 aaPredicted RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 TEPSINQ96N21 525 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 DHX36Q9H2U1 1008 aaKnown RBP4.13□□□□□ -1.75
MCF2-202ENST00000370573 PRDM16Q9HAZ2 1276 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 TMOD2Q9NZR1 351 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 PI4KBQ9UBF8 816 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 SERPINB13Q9UIV8 391 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 HACL1Q9UJ83 578 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 ATRNL1Q5VV63 1379 aa4.13□□□□□ -1.75
MCF2-202ENST00000370573 GLTPD2A6NH11 291 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 PPP1R12AO14974 1030 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 GSC2O15499 205 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 MYO1BO43795 1136 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 PFKFB2O60825 505 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 AOC2O75106 756 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 HLA-DOAP06340 250 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CELA3AP09093 270 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 AKR1B1P15121 316 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 POU3F3P20264 500 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 DDIT3P35638 169 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 STK3Q13188 491 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ANKRD1Q15327 319 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 DDR2Q16832 855 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ANGEL2Q5VTE6 544 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 DLK2Q6UY11 383 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 RAB11FIP4Q86YS3 637 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 FOXP4Q8IVH2 680 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 ENAHQ8N8S7 591 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 FBXO27Q8NI29 283 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 TMEM87BQ96K49 555 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 WDR18Q9BV38 432 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 SRRTQ9BXP5 876 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 TNKS2Q9H2K2 1166 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CCDC86Q9H6F5 360 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 MKNK2Q9HBH9 465 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 PPP1R9AQ9ULJ8 1098 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 STRIP2Q9ULQ0 834 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ANGEL1Q9UNK9 670 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 HIF3AQ9Y2N7 669 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 COL2A1P02458 1487 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 TNKSO95271 1327 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 POLR2AP24928 1970 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 IGKV6D-41A0A0C4DH26 115 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 KLF18A0A0U1RQI7 1052 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 TSPY2A6NKD2 308 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CTDNEP1O95476 244 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 GUCY1A2P33402 732 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ADMP35318 185 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 LIFRP42702 1097 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ASPAP45381 313 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 NOVP48745 357 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CDKN1CP49918 316 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 SCRN1Q12765 414 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 PRAMEF18Q5VWM3 479 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 TATDN1Q6P1N9 297 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 MIGA2Q7L4E1 593 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 SGMS1Q86VZ5 419 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CCDC83Q8IWF9 413 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ZNF444Q8N0Y2 327 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 ANKS1AQ92625 1134 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 ZNF274Q96GC6 653 aaPredicted RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 MTA3Q9BTC8 594 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 MYL10Q9BUA6 226 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 CCDC113Q9H0I3 377 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 NCOA5Q9HCD5 579 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 ADARB2Q9NS39 739 aaKnown RBP4.12□□□□□ -1.75
MCF2-202ENST00000370573 TCP11L1Q9NUJ3 509 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 TMEM39AQ9NV64 488 aa4.12□□□□□ -1.75
MCF2-202ENST00000370573 PRR19A6NJB7 356 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 DYNC1LI2O43237 492 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 F13BP05160 661 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TSPY3P0CV98 308 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TSPY8P0CW00 308 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 RXRAP19793 462 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CD97P48960 835 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 TBX4P57082 545 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CCT2P78371 535 aaKnown RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 CAMK2GQ13555 558 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 PWP1Q13610 501 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 WTAPQ15007 396 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 ODR4Q5SWX8 454 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 NBPF12Q5TAG4 269 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 APOA5Q6Q788 366 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 SIAH1Q8IUQ4 282 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CRACR2BQ8N4Y2 399 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 GTF3C6Q969F1 213 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 INTS4Q96HW7 963 aaKnown RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 UBAC1Q9BSL1 405 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 DEFB129Q9H1M3 183 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 SLKQ9H2G2 1235 aaPredicted RBP4.11□□□□□ -1.75
MCF2-202ENST00000370573 SEMA6CQ9H3T2 930 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 CBX8Q9HC52 389 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 GGA3Q9NZ52 723 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 SWAP70Q9UH65 585 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 GOLGA8BA8MQT2 603 aa4.11□□□□□ -1.75
MCF2-202ENST00000370573 JAK2O60674 1132 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms