RNA–Protein interactions for RNA: ENST00000370225.3

ABCA4-201, Transcript of ATP binding cassette subfamily A member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA4, Length 7,309 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-201ENST00000370225 POTEB3A0JP26 581 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 TRIM49BA6NDI0 452 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 POTECB2RU33 542 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 SERPING1P05155 500 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
ABCA4-201ENST00000370225 MAP3K21Q5TCX8 1036 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 POTEBQ6S5H4 581 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 THOC1Q96FV9 657 aaKnown RBP9.18□□□□□ -0.94
ABCA4-201ENST00000370225 TOPORSQ9NS56 1045 aaPredicted RBP9.18□□□□□ -0.94
ABCA4-201ENST00000370225 INTS9Q9NV88 658 aaKnown RBP9.18□□□□□ -0.94
ABCA4-201ENST00000370225 KCNH4Q9UQ05 1017 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 SRPRBQ9Y5M8 271 aaKnown RBP9.18□□□□□ -0.94
ABCA4-201ENST00000370225 SAMD9LQ8IVG5 1584 aa9.18□□□□□ -0.94
ABCA4-201ENST00000370225 POTEFA5A3E0 1075 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 CD2BP2O95400 341 aaKnown RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 MT-ND3P03897 115 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SLFN14P0C7P3 912 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 POTEIP0CG38 1075 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 LCP1P13796 627 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ABCD1P33897 745 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 KIF19Q2TAC6 998 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 POTEGQ6S5H5 508 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 POTEEQ6S8J3 1075 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 CLEC4GQ6UXB4 293 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 DDX53Q86TM3 631 aaKnown RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 RUNDC3BQ96NL0 473 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 STRBPQ96SI9 672 aaKnown RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 FAM217BQ9NTX9 383 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 INTUQ9ULD6 942 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 AATKQ6ZMQ8 1374 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 TMTC3Q6ZXV5 915 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 NDUFAF2Q8N183 169 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SIK2Q9H0K1 926 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 MROH7-TTC4A0A0A0MT08 1334 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 DRP2Q13474 957 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 KIAA1755Q5JYT7 1200 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 LINC00301Q8NCQ3 95 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SLC13A4Q9UKG4 626 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 PYCARDQ9ULZ3 195 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ZCCHC11Q5TAX3 1644 aaKnown RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 UTYO14607 1347 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 PHEXP78562 749 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 AP1B1Q10567 949 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 RCSD1Q6JBY9 416 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SNX19Q92543 992 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 MAML1Q92585 1016 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 PCSK1NQ9UHG2 260 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 MAP3K4Q9Y6R4 1608 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 HECW2Q9P2P5 1572 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 PGRMC1O00264 195 aaKnown RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SRGAP2O75044 1071 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 TNFAIP2Q03169 654 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 KCNA1Q09470 495 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SCYL3Q8IZE3 742 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 OXER1Q8TDS5 423 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 BCL2L12Q9HB09 334 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 FBXO40Q9UH90 709 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ZBTB12Q9Y330 459 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 TTC37Q6PGP7 1564 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 DFFAO00273 331 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ACSL3O95573 720 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SLC10A5Q5PT55 438 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ACBD5Q5T8D3 534 aaPredicted RBP9.17□□□□□ -0.94
ABCA4-201ENST00000370225 CXorf38Q8TB03 319 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 SH2D3AQ9BRG2 576 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 EDEM3Q9BZQ6 932 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 KRT82Q9NSB4 513 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 ANAPC7Q9UJX3 599 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 CHD1O14646 1710 aa9.17□□□□□ -0.94
ABCA4-201ENST00000370225 A6NNZ2 444 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 LDHAP00338 332 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 GRIK1P39086 918 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 NOP14P78316 857 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 TUBB8Q3ZCM7 444 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 FAM81BQ96LP2 452 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 NDST4Q9H3R1 872 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SFMBT1Q9UHJ3 866 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 DNAJC12Q9UKB3 198 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SHROOM2Q13796 1616 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 ERVK-7P63135 1459 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 EXOC1LA0A1B0GW35 172 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 A0A1W2PQ27 194 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 A0A1W2PQ64 194 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 A0A1W2PQD8 194 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 MGEA5O60502 916 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 IFNAR1P17181 557 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 KLC3Q6P597 504 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SPON2Q9BUD6 331 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 CNOT7Q9UIV1 285 aaKnown RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 IRF1P10914 325 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 NNMTP40261 264 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 LMBRD2Q68DH5 695 aaPredicted RBP9.16□□□□□ -0.94
ABCA4-201ENST00000370225 PYROXD1Q8WU10 500 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 STAG1Q8WVM7 1258 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 KIF12Q96FN5 646 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 THAP9Q9H5L6 903 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 SPON1Q9HCB6 807 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 ORC6Q9Y5N6 252 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 UBE4BO95155 1302 aa9.16□□□□□ -0.94
ABCA4-201ENST00000370225 CYP19A1P11511 503 aaPredicted RBP9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms