RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 PSMD2Q13200 908 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 BARGINQ6ZT62 677 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 SCYL3Q8IZE3 742 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 NUDCD1Q96RS6 583 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 IKZF4Q9H2S9 585 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 CUEDC2Q9H467 287 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 BARHL2Q9NY43 387 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 CTNNAL1Q9UBT7 734 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 MTUS1Q9ULD2 1270 aa11.26□□□□□ -0.61
PRPF38B-201ENST00000370021 PNPLA7Q6ZV29 1317 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 CCDC188H7C350 402 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 CYTH3O43739 400 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM13AO94988 1023 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 MYL1P05976 194 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 TARSP26639 723 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 BYSLQ13895 437 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 RASIP1Q5U651 963 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 KCTD1Q719H9 257 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 BZW1Q7L1Q6 419 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 YTHDF3Q7Z739 585 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 SH3RF3Q8TEJ3 882 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 TNFRSF25Q93038 417 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 PURBQ96QR8 312 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 TGS1Q96RS0 853 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 PCIF1Q9H4Z3 704 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 RIC8AQ9NPQ8 531 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 MEGF6O75095 1541 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 BAG2O95816 211 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 CTCFP49711 727 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 KYNUQ16719 465 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 RAD54LQ92698 747 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM129AQ9BZQ8 928 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 PPP1R9AQ9ULJ8 1098 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 KRT16P08779 473 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 PLCB4Q15147 1175 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 LRIG3Q6UXM1 1119 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 TPH2Q8IWU9 490 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 UBL4BQ8N7F7 174 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 TPCN2Q8NHX9 752 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 PIGOQ8TEQ8 1089 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 CELF1Q92879 486 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 IQCDQ96DY2 449 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 BTBD6Q96KE9 485 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 C9orf72Q96LT7 481 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 NAP1L3Q99457 506 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 POP1Q99575 1024 aaKnown RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 HAO1Q9UJM8 370 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 AGAP1Q9UPQ3 857 aa11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 USP15Q9Y4E8 981 aaPredicted RBP11.25□□□□□ -0.61
PRPF38B-201ENST00000370021 STXBP3O00186 592 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 RANBP1P43487 201 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 CASP4P49662 377 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 UBXN2AP68543 259 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 KIAA1755Q5JYT7 1200 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 C6orf118Q5T5N4 469 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 CCDC137Q6PK04 289 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 SFR1Q86XK3 245 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 JAMLQ86YT9 394 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 VPS52Q8N1B4 723 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 VGLL2Q8N8G2 317 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 C4orf32Q8N8J7 132 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 CCT6BQ92526 530 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 MCUR1Q96AQ8 359 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 HOOK2Q96ED9 719 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 DLGAP2Q9P1A6 1054 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 AFDNP55196 1824 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 DDX39AO00148 427 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 EXOC3O60645 756 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 MMP14P50281 582 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 TSNAXIP1Q2TAA8 658 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 HGSNATQ68CP4 663 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ZC3H18Q86VM9 953 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ERP27Q96DN0 273 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 PWWP2AQ96N64 755 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 CYTH2Q99418 400 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 RIOK1Q9BRS2 568 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 TRIM4Q9C037 500 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 DDX60Q8IY21 1712 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 MYH6P13533 1939 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 IFNB1P01574 187 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 RBM5P52756 815 aaKnown RBP eCLIP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 EIF3BP55884 814 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 IRX1P78414 480 aaPredicted RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ERFEQ4G0M1 354 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 RBM26Q5T8P6 1007 aaKnown RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 FAM43BQ6ZT52 329 aaPredicted RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 KIAA0825Q8IV33 1275 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ERP44Q9BS26 406 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 VPS37BQ9H9H4 285 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ZNF287Q9HBT7 754 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 DNAJC12Q9UKB3 198 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 DNM3Q9UQ16 869 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 ARFGEF2Q9Y6D5 1785 aa11.24□□□□□ -0.61
PRPF38B-201ENST00000370021 PIAS1O75925 651 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 DLATP10515 647 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 GNAT1P11488 350 aa11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 RPL13P26373 211 aaKnown RBP11.23□□□□□ -0.61
PRPF38B-201ENST00000370021 ALDH3A1P30838 453 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms