RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ASZ1Q8WWH4 475 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ESRRBO95718 433 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 LRRC63Q05C16 580 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 LRRC24Q50LG9 513 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 OR6B2Q6IFH4 312 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 VPS39Q96JC1 886 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 GCNAQ96QF7 691 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 SYTL2Q9HCH5 934 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ERVV-2B6SEH9 535 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 TMCC1O94876 653 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ADORA1P30542 326 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 GGCXP38435 758 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 EFTUD2Q15029 972 aaKnown RBP eCLIP13.31□□□□□ -0.284e-7■■■■□ 20.4
HCFC1-202ENST00000369984 TEX9Q8N6V9 391 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ASXL2Q76L83 1435 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 MXI1P50539 228 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 PPP4R3CPQ6ZMV5 832 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 PLA2G4BP0C869 781 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 AARSP49588 968 aaKnown RBP eCLIP13.31□□□□□ -0.28
HCFC1-202ENST00000369984 TSPY1Q01534 308 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 HIF1AQ16665 826 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 MMTAG2Q9BU76 263 aaKnown RBP13.31□□□□□ -0.28
HCFC1-202ENST00000369984 CFAP74Q9C0B2 1584 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 SRGAP2CP0DJJ0 459 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 GYS2P54840 703 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ARPP19P56211 112 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 SF3B3Q15393 1217 aaKnown RBP13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ARMCX2Q7L311 632 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ZNF496Q96IT1 587 aaPredicted RBP13.31□□□□□ -0.28
HCFC1-202ENST00000369984 EMILIN3Q9NT22 766 aa13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ADD3Q9UEY8 706 aaKnown RBP13.31□□□□□ -0.28
HCFC1-202ENST00000369984 ECT2Q9H8V3 914 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 CHCHD3Q9NX63 227 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ZNF804BA4D1E1 1349 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 KCNV2Q8TDN2 545 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 MTBPQ96DY7 904 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 MTRQ99707 1265 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 SHROOM2Q13796 1616 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 YEATS2Q9ULM3 1422 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 APOA5Q6Q788 366 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 MMS22LQ6ZRQ5 1243 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 CATSPER3Q86XQ3 398 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 AP5M1Q9H0R1 490 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 TRPC1P48995 793 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 HNRNPH2P55795 449 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ARL4CP56559 192 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 MAGOHP61326 146 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 MRPS25P82663 173 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 RHOT2Q8IXI1 618 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 KDM5DQ9BY66 1539 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 PAPOLAP51003 745 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 UBE3AQ05086 875 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 SULF1Q8IWU6 871 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ANAPC7Q9UJX3 599 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ARHGEF25Q86VW2 580 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ERICH1Q86X53 443 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 TGS1Q96RS0 853 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 STOML1Q9UBI4 398 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 SRPRBQ9Y5M8 271 aaKnown RBP13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ARHGEF37A1IGU5 675 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 TOGARAM2Q6ZUX3 1019 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 FAM47EQ6ZV65 393 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 ASPSCR1Q9BZE9 553 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 NDST4Q9H3R1 872 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 DIABLOQ9NR28 239 aa13.3□□□□□ -0.28
HCFC1-202ENST00000369984 HADHAP40939 763 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 NR1H3Q13133 447 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 SURF1Q15526 300 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 NDUFAF2Q8N183 169 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 UBN2Q6ZU65 1347 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 KPNA7A9QM74 516 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 BNIP3LO60238 219 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 PDCLQ13371 301 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 TEDDM1Q5T9Z0 273 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 PAGE5Q96GU1 130 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 EPAS1Q99814 870 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 KLHL8Q9P2G9 620 aaPredicted RBP13.29□□□□□ -0.28
HCFC1-202ENST00000369984 DCTN4Q9UJW0 460 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 RNF103-CHMP3A0A140T963 221 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 CYP27A1Q02318 531 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 NR5A1Q13285 461 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 KCTD2Q14681 263 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 UBE3CQ15386 1083 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 RBBP7Q16576 425 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 IFT43Q96FT9 208 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 FTOQ9C0B1 505 aaKnown RBP eCLIP13.29□□□□□ -0.28
HCFC1-202ENST00000369984 NFKBIAP25963 317 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 DYNC1I2Q13409 638 aaKnown RBP13.29□□□□□ -0.28
HCFC1-202ENST00000369984 TTC8Q8TAM2 541 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 SH3GL2Q99962 352 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 HEY1Q9Y5J3 304 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 SEMA3EO15041 775 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 SUPT3HO75486 399 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 MARK3P27448 753 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 ELMSAN1Q6PJG2 1045 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 TTLL7Q6ZT98 887 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 PPP1R16BQ96T49 567 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 SRGAP2O75044 1071 aa13.29□□□□□ -0.28
HCFC1-202ENST00000369984 PPP6R3Q5H9R7 873 aaPredicted RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms