RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 APBA1Q02410 837 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 PDXDC1Q6P996 788 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 SH3RF1Q7Z6J0 888 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 CATSPER3Q86XQ3 398 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 RHOT2Q8IXI1 618 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 CCDC105Q8IYK2 499 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 AFAP1L1Q8TED9 768 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 UBLCP1Q8WVY7 318 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 INO80BQ9C086 356 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 JPH1Q9HDC5 661 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MED4Q9NPJ6 270 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ZNF302Q9NR11 478 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 SLC9A2Q9UBY0 812 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 HACL1Q9UJ83 578 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 DNAJC12Q9UKB3 198 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 DGAT1O75907 488 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 VIL1P09327 827 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ECE1P42892 770 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 VAMP7P51809 220 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 BAATQ14032 418 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 HAUS6Q7Z4H7 955 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 CHST13Q8NET6 341 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ANKRD36BP1Q96IX9 119 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 NSRP1Q9H0G5 558 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 GGA3Q9NZ52 723 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 PFASO15067 1338 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 DENND3A2RUS2 1198 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MYO1FO00160 1098 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 PGRMC1O00264 195 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 SLC16A4O15374 487 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 XPOTO43592 962 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 LRRN2O75325 713 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MOCS3O95396 460 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 CYP11B2P19099 503 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MAN1A1P33908 653 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 FXR1P51114 621 aaKnown RBP eCLIP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 IRX5P78411 483 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 XKR3Q5GH77 459 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 FIGNQ5HY92 759 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 SWSAP1Q6NVH7 229 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 GRK7Q8WTQ7 553 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 GTF3C2Q8WUA4 911 aaPredicted RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 AKT1S1Q96B36 256 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 GPRASP2Q96D09 838 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 MTRQ99707 1265 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 C2orf40Q9H1Z8 148 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 ANKEF1Q9NU02 776 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 FAM198AQ9UFP1 575 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 NOD1Q9Y239 953 aa5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 DIS3Q9Y2L1 958 aaKnown RBP5.76□□□□□ -1.49
SMNDC1-202ENST00000369603 NUP188Q5SRE5 1749 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 DOT1LQ8TEK3 1739 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA6CA6NDK9 693 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 SMIM22K7EJ46 135 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 AP5Z1O43299 807 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GYPCP04921 128 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA6DP0CG33 693 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CD44P16070 742 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 LACTBP83111 547 aaPredicted RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MDM2Q00987 491 aaPredicted RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 E2F4Q16254 413 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CENPPQ6IPU0 288 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 TTI2Q6NXR4 508 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 ENOSF1Q7L5Y1 443 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 SAMD7Q7Z3H4 446 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 HPS3Q969F9 1004 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 HVCN1Q96D96 273 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MSTO1Q9BUK6 570 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 KIAA1683Q9H0B3 1180 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 MRPL47Q9HD33 250 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 KCNH7Q9NS40 1196 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GOLGA6AQ9NYA3 693 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 ASIC3Q9UHC3 531 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PCDHB4Q9Y5E5 795 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CD2APQ9Y5K6 639 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 A0A1W2PRG0 241 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 ASB14A6NK59 587 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 TBC1D12O60347 775 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 SLC25A27O95847 323 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PLS3P13797 630 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 EZRP15311 586 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 BACE1P56817 501 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GABPAQ06546 454 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GRM1Q13255 1194 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 TTLL4Q14679 1199 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 HADHQ16836 314 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 GLE1Q53GS7 698 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 DNAJC21Q5F1R6 531 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 KRT39Q6A163 491 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 CCDC25Q86WR0 208 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PSPC1Q8WXF1 523 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 SYN2Q92777 582 aaPredicted RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 ZNF653Q96CK0 615 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 OTUD5Q96G74 571 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 AGBL1Q96MI9 1066 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PDE11AQ9HCR9 933 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 PPP1R9AQ9ULJ8 1098 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 NMT1P30419 496 aaKnown RBP5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 EFNA5P52803 228 aa5.75□□□□□ -1.49
SMNDC1-202ENST00000369603 RPS6P62753 249 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms