RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 MTERF2Q49AM1 385 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 FAM102BQ5T8I3 360 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 TMEM139Q8IV31 216 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 KIAA1524Q8TCG1 905 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 MAML3Q96JK9 1138 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 FLRT1Q9NZU1 646 aa15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 ABT1Q9ULW3 272 aaKnown RBP15.56■□□□□ 0.08
HMGCS2-201ENST00000369406 GYPCP04921 128 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 TXNP10599 105 aaKnown RBP15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 CASP4P49662 377 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 UBXN1Q04323 297 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 RBL2Q08999 1139 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 FOXR2Q6PJQ5 311 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 C17orf99Q6UX52 265 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 ADGRA3Q8IWK6 1321 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 MLXIPQ9HAP2 919 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 TRAF3IP3Q9Y228 551 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 IVNS1ABPQ9Y6Y0 642 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 ASB14A6NK59 587 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 STRNO43815 780 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 OATP04181 439 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 PLS3P13797 630 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 ADCYAP1R1P41586 468 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 MTIF2P46199 727 aaKnown RBP15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 FXR1P51114 621 aaKnown RBP eCLIP15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 ARHGAP1Q07960 439 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 CRHR2Q13324 411 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 CYP4F22Q6NT55 531 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 TSG101Q99816 390 aa15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 MAGEC2Q9UBF1 373 aaPredicted RBP15.55■□□□□ 0.08
HMGCS2-201ENST00000369406 RBAK-RBAKDNI3L0D1 243 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 K7ENM7 598 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 EIF3DO15371 548 aaKnown RBP eCLIP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 SLC16A4O15374 487 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 NR2F2P24468 414 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 MARK3P27448 753 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 PEX3P56589 373 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 FKBP3Q00688 224 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 MORN1Q5T089 497 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 ZSWIM2Q8NEG5 633 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 CPLX3Q8WVH0 158 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 CCDC43Q96MW1 224 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 SEL1LQ9UBV2 794 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 TPM3P06753 285 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 MSNP26038 577 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 CAP1Q01518 475 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 ADAM9Q13443 819 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 XKR3Q5GH77 459 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 DPP9Q86TI2 863 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 ZBTB10Q96DT7 871 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 SPATA33Q96N06 139 aa15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 NOC4LQ9BVI4 516 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 TYW1Q9NV66 732 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 DIS3Q9Y2L1 958 aaKnown RBP15.54■□□□□ 0.08
HMGCS2-201ENST00000369406 ZBTB42B2RXF5 422 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 PES1O00541 588 aaKnown RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 PDXKO00764 312 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 TLR2O60603 784 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 AKAP3O75969 853 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 NR3C1P04150 777 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 SKILP12757 684 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 MAPK4P31152 587 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 GSDMDP57764 484 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 DRP2Q13474 957 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 CCL14Q16627 93 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 EDRF1Q3B7T1 1238 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 FILIP1LQ4L180 1135 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 SMC1BQ8NDV3 1235 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 AFAP1L1Q8TED9 768 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 SEPT1Q8WYJ6 367 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 TMX1Q9H3N1 280 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 RBM47A0AV96 593 aaKnown RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 USP27XA6NNY8 438 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 ZNF500O60304 480 aaPredicted RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 LGR5O75473 907 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 CASP14P31944 242 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 STAT5BP51692 787 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 TARBP2Q15633 366 aaKnown RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 PRAMEF19Q5SWL8 479 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 ZNF467Q7Z7K2 595 aaPredicted RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 DHX37Q8IY37 1157 aaKnown RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 TMEM143Q96AN5 459 aa15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 MPHOSPH6Q99547 160 aaKnown RBP15.53■□□□□ 0.08
HMGCS2-201ENST00000369406 ITIH6Q6UXX5 1313 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 SLC15A5A6NIM6 579 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 EPHB6O15197 1021 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 SFPQP23246 707 aaKnown RBP eCLIP15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 NPTX2P47972 431 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 NCKAP1LP55160 1127 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 TTLL4Q14679 1199 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 EMC2Q15006 297 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 VWA3BQ502W6 1294 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 OTUD6AQ7L8S5 288 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 FAM114A1Q8IWE2 563 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 CCDC150Q8NCX0 1101 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 ANKRD20A12PQ8NF67 263 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 ASAP3Q8TDY4 903 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 SCFD2Q8WU76 684 aa15.52■□□□□ 0.08
HMGCS2-201ENST00000369406 LENG1Q96BZ8 264 aaPredicted RBP15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms