RNA–Protein interactions for RNA: ENST00000369089.3

PRDM1-201, Transcript of PR/SET domain 1, humanhuman

TSL 1 (best) BASIC

Gene PRDM1, Length 4,675 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-201ENST00000369089 PASD1Q8IV76 773 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 AENQ8WTP8 325 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 FERMT2Q96AC1 680 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ZFRQ96KR1 1074 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ZMYM6O95789 1325 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 NOTOA8MTQ0 251 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 APOA1P02647 267 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ITGA2BP08514 1039 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 HSPA1AP0DMV8 641 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 HSPA1BP0DMV9 641 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 PTDSS1P48651 473 aaKnown RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ADCK5Q3MIX3 580 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 TSGA10IPQ3SY00 556 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 TCP11X2Q5H9J9 407 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 PCNX4Q63HM2 1172 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 LRRC74BQ6ZQY2 392 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 OR2W6PQ8NHA6 318 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 CALML4Q96GE6 196 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 FBXO2Q9UK22 296 aaPredicted RBP11.16□□□□□ -0.62
PRDM1-201ENST00000369089 ARAP3Q8WWN8 1544 aa11.16□□□□□ -0.62
PRDM1-201ENST00000369089 CFAP69A5D8W1 941 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 ZNF839A8K0R7 811 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 PDLIM1O00151 329 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 LINGO3P0C6S8 592 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 PMS1P54277 932 aaKnown RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 HAND2P61296 217 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 WASHC5Q12768 1159 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 LRRC36Q1X8D7 754 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 C15orf59Q2T9L4 293 aaPredicted RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 TTMPQ5BVD1 217 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 FRA10AC1Q70Z53 315 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 KSR1Q8IVT5 923 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SLC26A7Q8TE54 656 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SUN2Q9UH99 717 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 ZMYND8Q9ULU4 1186 aaPredicted RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 POTEB3A0JP26 581 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 TOM1O60784 492 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 PPP6R2O75170 966 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SCG2P13521 617 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 MAP4P27816 1152 aaKnown RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 KCNJ2P63252 427 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 POTEBQ6S5H4 581 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 HIPK4Q8NE63 616 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 MDM1Q8TC05 714 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 DDX17Q92841 729 aaKnown RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 DHTKD1Q96HY7 919 aaPredicted RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 CLIC5Q9NZA1 410 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 FADS3Q9Y5Q0 445 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SYNMO15061 1565 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 UPP2O95045 317 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 FTCDO95954 541 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 RAB15P59190 212 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 PDAP1Q13442 181 aaKnown RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 LIN52Q52LA3 116 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 SPICE1Q8N0Z3 855 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 ST13P5Q8NFI4 369 aaPredicted RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 CAPSLQ8WWF8 208 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 GSDMAQ96QA5 445 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 DNAJC17Q9NVM6 304 aaKnown RBP11.15□□□□□ -0.62
PRDM1-201ENST00000369089 ARHGEF10O15013 1369 aa11.15□□□□□ -0.62
PRDM1-201ENST00000369089 A0A0G2JND7 137 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 BRAFP15056 766 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 PTH1RQ03431 593 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 ADAM9Q13443 819 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 KRT31Q15323 416 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 RFX8Q6ZV50 586 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 IL17REQ8NFR9 667 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 MLXIPLQ9NP71 852 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 PHF24Q9UPV7 400 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 PLEKHG1Q9ULL1 1385 aa11.15□□□□□ -0.63
PRDM1-201ENST00000369089 PPIP5K2O43314 1243 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TRIM16O95361 564 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 HMGB2P26583 209 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 SMARCA1P28370 1054 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TMEM67Q5HYA8 995 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 MCF2L2Q86YR7 1114 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 DGCR14Q96DF8 476 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 MOSPD1Q9UJG1 213 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 ABCC3O15438 1527 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 KIAA0232Q92628 1395 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 IQGAP3Q86VI3 1631 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 VDRP11473 427 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 THOC5Q13769 683 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TJAP1Q5JTD0 557 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 CDHR1Q96JP9 859 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 AATKQ6ZMQ8 1374 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 ROBO2Q9HCK4 1378 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 KIF1BO60333 1816 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 SNTNA6NMZ2 147 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 EEF1B2P24534 225 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TARSP26639 723 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 EEF1GP26641 437 aaKnown RBP11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TRIP10Q15642 601 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 TAS2R42Q7RTR8 314 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 HAUS7Q99871 368 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 EFHD1Q9BUP0 239 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 CSRNP2Q9H175 543 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 RAD21L1Q9H4I0 556 aa11.14□□□□□ -0.63
PRDM1-201ENST00000369089 CD209Q9NNX6 404 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms