RNA–Protein interactions for RNA: ENST00000368964.3

SETDB1-204, Transcript of SET domain bifurcated 1, humanhuman

TSL 5

Gene SETDB1, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SETDB1-204ENST00000368964 NKX2-4Q9H2Z4 354 aa6.96□□□□□ -1.3
SETDB1-204ENST00000368964 RBM28Q9NW13 759 aaKnown RBP6.96□□□□□ -1.3
SETDB1-204ENST00000368964 SCHIP1Q9P0W5 487 aaPredicted RBP6.96□□□□□ -1.3
SETDB1-204ENST00000368964 GMPR2Q9P2T1 348 aaKnown RBP6.96□□□□□ -1.3
SETDB1-204ENST00000368964 GTF2IRD1Q9UHL9 959 aa6.96□□□□□ -1.3
SETDB1-204ENST00000368964 PCDHA6Q9UN73 950 aa6.96□□□□□ -1.3
SETDB1-204ENST00000368964 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
SETDB1-204ENST00000368964 PCDHA8Q9Y5H6 950 aa6.96□□□□□ -1.3
SETDB1-204ENST00000368964 SMCO2A6NFE2 343 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 FIBPO43427 364 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 KPNA6O60684 536 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 FGBP02675 491 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 IQCF3P0C7M6 154 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SMIM10L2AP0DMW4 78 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SMIM10L2BP0DMW5 78 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 KCNA2P16389 499 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 EPHA4P54764 986 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SMAD3P84022 425 aaKnown RBP6.95□□□□□ -1.3
SETDB1-204ENST00000368964 TRAF1Q13077 416 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 MTMR1Q13613 665 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 GRIN2CQ14957 1233 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 ZNF618Q5T7W0 954 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 TMEM164Q5U3C3 297 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SPRED2Q7Z698 418 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 STK32AQ8WU08 396 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 TIFAQ96CG3 184 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 AIFM3Q96NN9 605 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 CDX2Q99626 313 aaPredicted RBP6.95□□□□□ -1.3
SETDB1-204ENST00000368964 GPR20Q99678 358 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 C16orf70Q9BSU1 422 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SLC26A6Q9BXS9 759 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 USP26Q9BXU7 913 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 ANO3Q9BYT9 981 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SEMA6BQ9H3T3 888 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 CERS4Q9HA82 394 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 RIC8AQ9NPQ8 531 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 SETD4Q9NVD3 440 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 MAP3K20Q9NYL2 800 aaKnown RBP6.95□□□□□ -1.3
SETDB1-204ENST00000368964 VPS54Q9P1Q0 977 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 GBF1Q92538 1859 aa6.95□□□□□ -1.3
SETDB1-204ENST00000368964 FIGNL2A6NMB9 653 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 H3BRB1 525 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 HAS3O00219 553 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TREHO43280 583 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 NBNO60934 754 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 ARHGEF15O94989 841 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 CENPBP07199 599 aaPredicted RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 HMGB1P09429 215 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 SUPT20HL2P0C7V6 817 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 ARP10275 920 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 CKBP12277 381 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 SCG2P13521 617 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 FOSL2P15408 326 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 ATP2A2P16615 1042 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 SMARCA1P28370 1054 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 PDIA3P30101 505 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TCF7P36402 384 aaPredicted RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 THPOP40225 353 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 IGBP1P78318 339 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 ARHGAP4P98171 946 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 FOXK2Q01167 660 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 MBTPS1Q14703 1052 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 GPNMBQ14956 572 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 PKN1Q16512 942 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 PFKFB3Q16875 520 aaPredicted RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 RASIP1Q5U651 963 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 FAM117BQ6P1L5 589 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 METTL7BQ6UX53 244 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 RUFY4Q6ZNE9 571 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 RUFY3Q7L099 469 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 LRRC8DQ7L1W4 858 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TRMT1LQ7Z2T5 733 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 NLRX1Q86UT6 975 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 RETREG2Q8NC44 543 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 RHBDD1Q8TEB9 315 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TRAPPC12Q8WVT3 735 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 PPM1EQ8WY54 764 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 HERVK_113Q902F9 699 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 ATP6V0A1Q93050 837 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 GJA10Q969M2 543 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 KATNAL1Q9BW62 490 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 NIFKQ9BYG3 293 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 MAF1Q9H063 256 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 PRDM12Q9H4Q4 367 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TUT1Q9H6E5 874 aaKnown RBP6.94□□□□□ -1.3
SETDB1-204ENST00000368964 BARHL2Q9NY43 387 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 UBIAD1Q9Y5Z9 338 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 CYP46A1Q9Y6A2 500 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 SLC4A7Q9Y6M7 1214 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 VCANP13611 3396 aa6.94□□□□□ -1.3
SETDB1-204ENST00000368964 TRANK1O15050 2925 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.93□□□□□ -1.3
SETDB1-204ENST00000368964 GSTTP1A0A1W2PQM5 241 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 C17orf102A2RUQ5 167 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 LCHNA4D1U4 455 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 FAM86B1E9PN63 330 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 RFXAPO00287 272 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 PPFIA4O75335 1185 aa6.93□□□□□ -1.3
SETDB1-204ENST00000368964 CA3P07451 260 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms