RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 A0A0G2JLL6 359 aaPredicted RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 IPO7O95373 1038 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 SP2Q02086 613 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 PPATQ06203 517 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 SEMA3FQ13275 785 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 RINT1Q6NUQ1 792 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 LBX2Q6XYB7 198 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 CYFIP1Q7L576 1253 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 PRRT2Q7Z6L0 340 aaPredicted RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 CEP112Q8N8E3 955 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 OR8K1Q8NGG5 319 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 GDAP1L1Q96MZ0 367 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 NAPGQ99747 312 aaPredicted RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 PORCNQ9H237 461 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 TRIM10Q9UDY6 481 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 UBIAD1Q9Y5Z9 338 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 EPN1Q9Y6I3 576 aaPredicted RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 ENC1O14682 589 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 ATP8B1O43520 1251 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 TBCAO75347 108 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 CCNE1P24864 410 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 TBC1D8BQ0IIM8 1120 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 CCDC65Q8IXS2 484 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 MYOCDQ8IZQ8 938 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 NSUN6Q8TEA1 469 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 MAGEF1Q9HAY2 307 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 ABCB6Q9NP58 842 aa11.69□□□□□ -0.54
TPM3-212ENST00000368533 ZNHIT6Q9NWK9 470 aaKnown RBP11.69□□□□□ -0.54
TPM3-212ENST00000368533 RPTORQ8N122 1335 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 HTTP42858 3142 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CTAGE15A4D2H0 777 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CTAGE8P0CG41 777 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 SCP2P22307 547 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 SETQ01105 290 aaPredicted RBP11.68□□□□□ -0.54
TPM3-212ENST00000368533 APBA1Q02410 837 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CTAGE6Q86UF2 777 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 NLRX1Q86UT6 975 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CTAGE4Q8IX94 777 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 MB21D1Q8N884 522 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 SYT2Q8N9I0 419 aaPredicted RBP11.68□□□□□ -0.54
TPM3-212ENST00000368533 KIFC3Q9BVG8 833 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 MMRN2Q9H8L6 949 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 ADAMTS5Q9UNA0 930 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 ARHGEF35A5YM69 484 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 BACH1O14867 736 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 FAM13AO94988 1023 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CCND2P30279 289 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 PPP2R5CQ13362 524 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 TRIM14Q14142 442 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 RSRC2Q7L4I2 434 aaKnown RBP11.68□□□□□ -0.54
TPM3-212ENST00000368533 TADA2BQ86TJ2 420 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 SCFD1Q8WVM8 642 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 CRACR2AQ9BSW2 395 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 FAM204AQ9H8W3 233 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 DONSONQ9NYP3 566 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 RBPJLQ9UBG7 517 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 USP20Q9Y2K6 914 aa11.68□□□□□ -0.54
TPM3-212ENST00000368533 TISP43B9A030 160 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 MAP2K7O14733 419 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 NDUFA10O95299 355 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 HYIQ5T013 277 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 CCDC122Q5T0U0 273 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
TPM3-212ENST00000368533 SWSAP1Q6NVH7 229 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 PNMA8AQ86V59 439 aaPredicted RBP11.67□□□□□ -0.54
TPM3-212ENST00000368533 VSIG10LQ86VR7 867 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 RDH13Q8NBN7 331 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 RIN2Q8WYP3 895 aaPredicted RBP11.67□□□□□ -0.54
TPM3-212ENST00000368533 TUBGCP2Q9BSJ2 902 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 GABBR1Q9UBS5 961 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 PTPRFP10586 1907 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 PARP14Q460N5 1801 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 LRRC10BA6NIK2 292 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 ZC3H15Q8WU90 426 aaKnown RBP11.67□□□□□ -0.54
TPM3-212ENST00000368533 PPP1R13LQ8WUF5 828 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 CAPZA3Q96KX2 299 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 NOC4LQ9BVI4 516 aaKnown RBP11.67□□□□□ -0.54
TPM3-212ENST00000368533 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.67□□□□□ -0.548e-7■■■■■ 194.6
TPM3-212ENST00000368533 ITIH6Q6UXX5 1313 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 PAPPA2Q9BXP8 1791 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 KIAA1217Q5T5P2 1943 aa11.67□□□□□ -0.54
TPM3-212ENST00000368533 CCL15-CCL14A0A0B4J2E2 113 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 PVALEFA0A1B0GWK0 134 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 EYA4O95677 639 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 MYL1P05976 194 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 CCL15Q16663 113 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 LY6KQ17RY6 165 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 BEND6Q5SZJ8 279 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 AGTPBP1Q9UPW5 1226 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 SOWAHBA6NEL2 793 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 LGALS16A8MUM7 142 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 CNMDO75829 334 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 MARK3P27448 753 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 GSCP56915 257 aaPredicted RBP11.66□□□□□ -0.54
TPM3-212ENST00000368533 PPP2R5AQ15172 486 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 EPHA7Q15375 998 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 XKR9Q5GH70 373 aa11.66□□□□□ -0.54
TPM3-212ENST00000368533 ODR4Q5SWX8 454 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms