RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 PRPHP41219 470 aa25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 RABGGTBP53611 331 aa25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 ATP2C1P98194 919 aaPredicted RBP25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 LIN28BQ6ZN17 250 aaKnown RBP eCLIP25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 Q7L0L9 218 aa25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 IGSF22Q8N9C0 903 aa25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 MTMR6Q9Y217 621 aa25.1■■□□□ 1.61
ECHDC1-203ENST00000368291 TTC3P53804 2025 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 EFCAB14O75071 495 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 TMOD1P28289 359 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 CD52P31358 61 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 RESTQ13127 1097 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 KIZQ2M2Z5 673 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 TMCO2Q7Z6W1 182 aaPredicted RBP25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 APBB2Q92870 758 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 CEP170P1Q96L14 293 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 POLR3CQ9BUI4 534 aaPredicted RBP25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 ADAMTS10Q9H324 1103 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 DHX33Q9H6R0 707 aaKnown RBP25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 TUFT1Q9NNX1 390 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 AKT3Q9Y243 479 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 GINS2Q9Y248 185 aa25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 YBX2Q9Y2T7 364 aaKnown RBP25.09■■□□□ 1.61
ECHDC1-203ENST00000368291 A0A087WWV3 80 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 LOC101059915A0A1B0GWI6 518 aaPredicted RBP25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 KCNJ6P48051 423 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 NLRP11P59045 1033 aaKnown RBP25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 PDIA5Q14554 519 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 TMEM266Q2M3C6 531 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 OTUD6AQ7L8S5 288 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 HERC6Q8IVU3 1022 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 USP38Q8NB14 1042 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 MAP7D2Q96T17 732 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 OSMRQ99650 979 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 PADI3Q9ULW8 664 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 PPME1Q9Y570 386 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 MYO9BQ13459 2157 aa25.08■■□□□ 1.61
ECHDC1-203ENST00000368291 STX6O43752 255 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 MYOGP15173 224 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 RPA1P27694 616 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 CRYBB1P53674 252 aaPredicted RBP25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 XKR9Q5GH70 373 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 PIGOQ8TEQ8 1089 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 TTYH1Q9H313 450 aaPredicted RBP25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 ANKEF1Q9NU02 776 aa25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 NOC2LQ9Y3T9 749 aaKnown RBP25.07■■□□□ 1.6
ECHDC1-203ENST00000368291 GPC3P51654 580 aa25.06■■□□□ 1.6
ECHDC1-203ENST00000368291 ECM1Q16610 540 aa25.06■■□□□ 1.6
ECHDC1-203ENST00000368291 ZNF668Q96K58 619 aaPredicted RBP25.06■■□□□ 1.6
ECHDC1-203ENST00000368291 LRWD1Q9UFC0 647 aa25.06■■□□□ 1.6
ECHDC1-203ENST00000368291 PCDHA11Q9Y5I1 949 aa25.06■■□□□ 1.6
ECHDC1-203ENST00000368291 RFC5P40937 340 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 FAM173BQ6P4H8 233 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 RTN4RL1Q86UN2 441 aaPredicted RBP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 DEFB123Q8N688 67 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 LINC01599Q8WXQ3 324 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 TIFAQ96CG3 184 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 ERVK-5Q9HDB9 667 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 PP2D1A8MPX8 630 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 XRCC6P12956 609 aaKnown RBP eCLIP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 RARRES1P49788 294 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 POLGP54098 1239 aaPredicted RBP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 RAB30Q15771 203 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 POTEGQ6S5H5 508 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 DTHD1Q6ZMT9 781 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 FAM228AQ86W67 206 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 ERMNQ8TAM6 284 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 SLC7A3Q8WY07 619 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 JPH2Q9BR39 696 aaPredicted RBP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 TMX1Q9H3N1 280 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 XPNPEP1Q9NQW7 623 aa25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 BMP2KQ9NSY1 1161 aaPredicted RBP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 SUCLA2Q9P2R7 463 aaPredicted RBP25.05■■□□□ 1.6
ECHDC1-203ENST00000368291 ENPP3O14638 875 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 RPS6KA5O75582 802 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 CDC25AP30304 524 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 DNM2P50570 870 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 PAK2Q13177 524 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 ZNF697Q5TEC3 545 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 ARL6IP4Q66PJ3 421 aaKnown RBP25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 ZNF710Q8N1W2 664 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 MMTAG2Q9BU76 263 aaKnown RBP25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 NKX2-4Q9H2Z4 354 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 SEMA6BQ9H3T3 888 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 MTMR10Q9NXD2 777 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 MSRAQ9UJ68 235 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 CHD9Q3L8U1 2897 aa25.04■■□□□ 1.6
ECHDC1-203ENST00000368291 CDH23Q9H251 3354 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 TMEM265A0A087WTH1 108 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 GJB5O95377 273 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 AMHP03971 560 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 MUTP22033 750 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 CCT6AP40227 531 aaKnown RBP25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 EMC2Q15006 297 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 SF3A1Q15459 793 aaKnown RBP25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 HAUS3Q68CZ6 603 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 KSR1Q8IVT5 923 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 MYOCDQ8IZQ8 938 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 SPRYD3Q8NCJ5 442 aa25.03■■□□□ 1.6
ECHDC1-203ENST00000368291 TMEM143Q96AN5 459 aa25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms