RNA–Protein interactions for RNA: ENST00000367818.3

XCL1-201, Transcript of X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene XCL1, Length 1,367 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XCL1-201ENST00000367818 SLC4A7Q9Y6M7 1214 aa5.36□□□□□ -1.55
XCL1-201ENST00000367818 MYOM1P52179 1685 aa5.36□□□□□ -1.55
XCL1-201ENST00000367818 MEGF6O75095 1541 aa5.36□□□□□ -1.55
XCL1-201ENST00000367818 ZBED9Q6R2W3 1325 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 KIF20BQ96Q89 1820 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 NPHP3-ACAD11A0A0J9YXS1 232 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 TUBA3CQ13748 450 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 PPP2R5DQ14738 602 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 SEZ6Q53EL9 994 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 TUBA3EQ6PEY2 450 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 TRMT10BQ6PF06 316 aaKnown RBP5.35□□□□□ -1.55
XCL1-201ENST00000367818 MILR1Q7Z6M3 343 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 ZNF483Q8TF39 744 aaPredicted RBP5.35□□□□□ -1.55
XCL1-201ENST00000367818 PLEKHG4BQ96PX9 1271 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 PUS7Q96PZ0 661 aaKnown RBP5.35□□□□□ -1.55
XCL1-201ENST00000367818 SYT17Q9BSW7 474 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 MMRN2Q9H8L6 949 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 PANK3Q9H999 370 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 MARCH2Q9P0N8 246 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 CCNL1Q9UK58 526 aaPredicted RBP5.35□□□□□ -1.55
XCL1-201ENST00000367818 NHSQ6T4R5 1651 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 DOT1LQ8TEK3 1739 aa5.35□□□□□ -1.55
XCL1-201ENST00000367818 CASZ1Q86V15 1759 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 ABCC6O95255 1503 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 TCERG1O14776 1098 aaKnown RBP5.34□□□□□ -1.55
XCL1-201ENST00000367818 TP53P04637 393 aaPredicted RBP5.34□□□□□ -1.55
XCL1-201ENST00000367818 MAKP20794 623 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 EIF4A3P38919 411 aaKnown RBP5.34□□□□□ -1.55
XCL1-201ENST00000367818 ZNF165P49910 485 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 GPR162Q16538 588 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 EAPPQ56P03 285 aaPredicted RBP5.34□□□□□ -1.55
XCL1-201ENST00000367818 FNDC7Q5VTL7 733 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 BHLHA9Q7RTU4 235 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 TMEM209Q96SK2 561 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 MTFR1LQ9H019 292 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 PODXL2Q9NZ53 605 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 NINLQ9Y2I6 1382 aa5.34□□□□□ -1.55
XCL1-201ENST00000367818 MAP2P11137 1827 aaKnown RBP5.34□□□□□ -1.55
XCL1-201ENST00000367818 USP54Q70EL1 1684 aa5.34□□□□□ -1.56
XCL1-201ENST00000367818 FAM208AQ9UK61 1670 aaKnown RBP5.34□□□□□ -1.56
XCL1-201ENST00000367818 PNPLA7Q6ZV29 1317 aa5.34□□□□□ -1.56
XCL1-201ENST00000367818 SMG6Q86US8 1419 aaKnown RBP5.33□□□□□ -1.56
XCL1-201ENST00000367818 CYP27B1O15528 508 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 RAMP2O60895 175 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 ACO1P21399 889 aaKnown RBP5.33□□□□□ -1.56
XCL1-201ENST00000367818 MCM4P33991 863 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 RGS19P49795 217 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 COL23A1Q86Y22 540 aaPredicted RBP5.33□□□□□ -1.56
XCL1-201ENST00000367818 IL17DQ8TAD2 202 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 FAM86C1Q9NVL1 165 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 CGNL1Q0VF96 1302 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 BCL9O00512 1426 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 SHANK3Q9BYB0 1731 aa5.33□□□□□ -1.56
XCL1-201ENST00000367818 C2orf71A6NGG8 1288 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 BRD1O95696 1058 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 THBDP07204 575 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 POLD1P28340 1107 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 ZNF627Q7L945 461 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 TAX1BP1Q86VP1 789 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 FUKQ8N0W3 1084 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 NUDT10Q8NFP7 164 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 PIGBQ92521 554 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 NUDT11Q96G61 164 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 PRRX2Q99811 253 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 POLKQ9UBT6 870 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 TMEFF2Q9UIK5 374 aaPredicted RBP5.32□□□□□ -1.56
XCL1-201ENST00000367818 ASAP1Q9ULH1 1129 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 NSD2O96028 1365 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 INSRP06213 1382 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 FLT4P35916 1363 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 RGPD3A6NKT7 1758 aaPredicted RBP5.32□□□□□ -1.56
XCL1-201ENST00000367818 RGPD4Q7Z3J3 1758 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 TUBGCP6Q96RT7 1819 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 PCDH11XQ9BZA7 1347 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 PCDH11YQ9BZA8 1340 aa5.32□□□□□ -1.56
XCL1-201ENST00000367818 PALLDQ8WX93 1383 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 RRP9O43818 475 aaKnown RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 MRPS21P82921 87 aaKnown RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 EIF4A2Q14240 407 aaKnown RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 TCEAL1Q15170 157 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 DPY19L1Q2PZI1 675 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 CC2D1BQ5T0F9 858 aaKnown RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 ERMP1Q7Z2K6 904 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 TMC4Q7Z404 712 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 MORC1Q86VD1 984 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 TEX2Q8IWB9 1127 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 IFNL2Q8IZJ0 200 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 TAB3Q8N5C8 712 aaPredicted RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 RNF34Q969K3 372 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 UBP1Q9NZI7 540 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 LAS1LQ9Y4W2 734 aaKnown RBP5.31□□□□□ -1.56
XCL1-201ENST00000367818 ITGB4P16144 1822 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 RTL1A6NKG5 1358 aa5.31□□□□□ -1.56
XCL1-201ENST00000367818 CBFA2T2O43439 604 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 RAD17O75943 681 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 COL6A1P12109 1028 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 BMP5P22003 454 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 ACRV1P26436 265 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 COL10A1Q03692 680 aa5.3□□□□□ -1.56
XCL1-201ENST00000367818 APOBRQ0VD83 1088 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms