RNA–Protein interactions for RNA: ENST00000367569.3

SF3B5-201, Transcript of splicing factor 3b subunit 5, humanhuman

APPRIS P1 BASIC

Gene SF3B5, Length 693 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B5-201ENST00000367569 PPP2R5CQ13362 524 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 CTTNQ14247 550 aaKnown RBP16.47■□□□□ 0.23
SF3B5-201ENST00000367569 AAK1Q2M2I8 961 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 MYOCDQ8IZQ8 938 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 METTL13Q8N6R0 699 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 BBXQ8WY36 941 aaPredicted RBP16.47■□□□□ 0.23
SF3B5-201ENST00000367569 DYDC2Q96IM9 177 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 FAM20AQ96MK3 541 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 RGL1Q9NZL6 768 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 COG5Q9UP83 839 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 COL1A2P08123 1366 aa16.47■□□□□ 0.23
SF3B5-201ENST00000367569 VPS37CA5D8V6 355 aaPredicted RBP16.46■□□□□ 0.23
SF3B5-201ENST00000367569 CAND2O75155 1236 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 VTNP04004 478 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 IBSPP21815 317 aaPredicted RBP16.46■□□□□ 0.23
SF3B5-201ENST00000367569 HTRA4P83105 476 aaPredicted RBP16.46■□□□□ 0.23
SF3B5-201ENST00000367569 MGAT3Q09327 533 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 TAF2Q6P1X5 1199 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 SEPT8Q92599 483 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 FAM167AQ96KS9 214 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 LXNQ9BS40 222 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 C17orf80Q9BSJ5 609 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 LMCD1Q9NZU5 365 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 KIF3AQ9Y496 699 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 INSL6Q9Y581 213 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.46■□□□□ 0.23
SF3B5-201ENST00000367569 PCDHB6Q9Y5E3 794 aa16.46■□□□□ 0.23
SF3B5-201ENST00000367569 A0A087WWV3 80 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 LOC101059915A0A1B0GWI6 518 aaPredicted RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 K7ELQ4 463 aaPredicted RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 TBX3O15119 743 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 BAG4O95429 457 aaKnown RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 TOB1P50616 345 aaPredicted RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 CUL4AQ13619 759 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 LPIN1Q14693 890 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 TMEM266Q2M3C6 531 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 ZNF484Q5JVG2 852 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 FAM26DQ5JW98 314 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 FERMT3Q86UX7 667 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 SLFN12Q8IYM2 578 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 SP7Q8TDD2 431 aaPredicted RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 HLA-CQ95604 372 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 TTC12Q9H892 705 aaPredicted RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 NOL7Q9UMY1 257 aaKnown RBP16.45■□□□□ 0.22
SF3B5-201ENST00000367569 PCDHA2Q9Y5H9 948 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 TRPV2Q9Y5S1 764 aa16.45■□□□□ 0.22
SF3B5-201ENST00000367569 DDX11L8A8MPP1 907 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 STBD1O95210 358 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 OR52Z1P0C646 297 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 U2AF2P26368 475 aaKnown RBP eCLIP16.44■□□□□ 0.22
SF3B5-201ENST00000367569 CD52P31358 61 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 NPEPPSP55786 919 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 DRP2Q13474 957 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 LARP1BQ659C4 914 aaKnown RBP16.44■□□□□ 0.22
SF3B5-201ENST00000367569 RSPH3Q86UC2 560 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 ZNF579Q8NAF0 562 aaKnown RBP16.44■□□□□ 0.22
SF3B5-201ENST00000367569 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 RDM1Q8NG50 284 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 TOP1MTQ969P6 601 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 MTMR9Q96QG7 549 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 CDHR5Q9HBB8 845 aa16.44■□□□□ 0.22
SF3B5-201ENST00000367569 SMIM35A0A1B0GVV1 85 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 ZBTB39O15060 712 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 UPP2O95045 317 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 PSMC5P62195 406 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 KIZQ2M2Z5 673 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 FBXO47Q5MNV8 452 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 ANO5Q75V66 913 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 TPH2Q8IWU9 490 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 TMEM40Q8WWA1 233 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 OSMRQ99650 979 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 EIF2AK1Q9BQI3 630 aaKnown RBP16.43■□□□□ 0.22
SF3B5-201ENST00000367569 IFIH1Q9BYX4 1025 aaKnown RBP16.43■□□□□ 0.22
SF3B5-201ENST00000367569 AGO3Q9H9G7 860 aaKnown RBP16.43■□□□□ 0.22
SF3B5-201ENST00000367569 PCDHA12Q9UN75 941 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 AKT3Q9Y243 479 aa16.43■□□□□ 0.22
SF3B5-201ENST00000367569 KIAA1671Q9BY89 1806 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 NLRC5Q86WI3 1866 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 M0QZ92 97 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 TECP42680 631 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 QARSP47897 775 aaKnown RBP16.42■□□□□ 0.22
SF3B5-201ENST00000367569 TBC1D8BQ0IIM8 1120 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 EPHA7Q15375 998 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 XKR3Q5GH77 459 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 EFCAB12Q6NXP0 572 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 RPAINQ86UA6 219 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 HSCBQ8IWL3 235 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 KIAA0319LQ8IZA0 1049 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 FBXO22Q8NEZ5 403 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 APBB2Q92870 758 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 TNPO1Q92973 898 aaKnown RBP16.42■□□□□ 0.22
SF3B5-201ENST00000367569 NRBP2Q9NSY0 501 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 CEP131Q9UPN4 1083 aa16.42■□□□□ 0.22
SF3B5-201ENST00000367569 EPC2Q52LR7 807 aa16.41■□□□□ 0.22
SF3B5-201ENST00000367569 SCLT1Q96NL6 688 aa16.41■□□□□ 0.22
SF3B5-201ENST00000367569 YME1L1Q96TA2 773 aa16.41■□□□□ 0.22
SF3B5-201ENST00000367569 CELF4Q9BZC1 486 aaKnown RBP16.41■□□□□ 0.22
SF3B5-201ENST00000367569 MYO7AQ13402 2215 aa16.41■□□□□ 0.22
SF3B5-201ENST00000367569 PP2D1A8MPX8 630 aa16.4■□□□□ 0.22
SF3B5-201ENST00000367569 P4HBP07237 508 aaKnown RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms