RNA–Protein interactions for RNA: ENST00000367478.8

TPR-201, Transcript of translocated promoter region, nuclear basket protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TPR, Length 9,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPR-201ENST00000367478 RANBP1P43487 201 aa13.26□□□□□ -0.29
TPR-201ENST00000367478 PROM2Q8N271 834 aa13.26□□□□□ -0.29
TPR-201ENST00000367478 B4GALNT2Q8NHY0 566 aa13.26□□□□□ -0.29
TPR-201ENST00000367478 GOLGA8SH3BPF8 625 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 INO80B-WBP1J3KQ70 363 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PJA2O43164 708 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 TRIM71Q2Q1W2 868 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 CATSPER3Q86XQ3 398 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PARP9Q8IXQ6 854 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ZNF280CQ8ND82 737 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 IFT43Q96FT9 208 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 INO80BQ9C086 356 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 PRAG1Q86YV5 1406 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 TARSL2A2RTX5 802 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 CCND2P30279 289 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ICA1Q05084 483 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 POLA2Q14181 598 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 HIPK4Q8NE63 616 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 GINM1Q9NU53 330 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 CCDC87Q9NVE4 849 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 CLCN6P51797 869 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 TRAF7Q6Q0C0 670 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ANKS3Q6ZW76 656 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 KRT27Q7Z3Y8 459 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP13.25□□□□□ -0.29
TPR-201ENST00000367478 TBC1D19Q8N5T2 526 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 YIPF3Q9GZM5 350 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 KIAA1586Q9HCI6 787 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 COBLO75128 1261 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 AARS2Q5JTZ9 985 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 PI4K2BQ8TCG2 481 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 KLHL8Q9P2G9 620 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 MTMR6Q9Y217 621 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 GRID2IPA4D2P6 1211 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PNMA6AP0CW24 399 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 CXCR5P32302 372 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ST13P50502 369 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 CTSWP56202 376 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 AASDHQ4L235 1098 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 BEND6Q5SZJ8 279 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 RPF1Q9H9Y2 349 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 PARVBQ9HBI1 364 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 FAM32AQ9Y421 112 aaKnown RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 LRRC31Q6UY01 552 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PRUNE1Q86TP1 453 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 FAM133AQ8N9E0 248 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 CMTM5Q96DZ9 223 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ZNF408Q9H9D4 720 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 CFAP43Q8NDM7 1665 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 USP17L12C9JPN9 530 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 USP17L21D6R901 530 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 TTLL1O95922 423 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PPP2R2AP63151 447 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 C16orf72Q14CZ0 275 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 HIF1AQ16665 826 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 C8orf37Q96NL8 207 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 PPP4R4Q6NUP7 873 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ASCC2Q9H1I8 757 aaPredicted RBP13.25□□□□□ -0.29
TPR-201ENST00000367478 TNKSO95271 1327 aa13.25□□□□□ -0.29
TPR-201ENST00000367478 ANKRD13CQ8N6S4 541 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ACAP3Q96P50 834 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 CCNL1Q9UK58 526 aaPredicted RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 NFU1Q9UMS0 254 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 MYO1CO00159 1063 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ZAP70P43403 619 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 SEMA3FQ13275 785 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 HABP4Q5JVS0 413 aaKnown RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 CENPPQ6IPU0 288 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ASNSD1Q9NWL6 643 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 NSMCE4AQ9NXX6 385 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 GFPT2O94808 682 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ADCY1Q08828 1119 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 HIC1Q14526 733 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 TOGARAM2Q6ZUX3 1019 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 TSSK1BQ9BXA7 367 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 SAYSD1Q9NPB0 183 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ARIH2O95376 493 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ELF1P32519 619 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 USP14P54578 494 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 CYLC2Q14093 348 aaPredicted RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 RASSF3Q86WH2 238 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ERICH1Q86X53 443 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 SCFD1Q8WVM8 642 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 GINS4Q9BRT9 223 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 GID8Q9NWU2 228 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 SYBUQ9NX95 663 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 TSC22D4Q9Y3Q8 395 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 FARP1Q9Y4F1 1045 aaPredicted RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 H0Y3Z8 333 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 ZMYND10O75800 440 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 LRRIQ3A6PVS8 624 aaPredicted RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 ZNF197O14709 1029 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 EIF2S1P05198 315 aaKnown RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 KLC1Q07866 573 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 TP53BP2Q13625 1128 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 MXD4Q14582 209 aaPredicted RBP13.24□□□□□ -0.29
TPR-201ENST00000367478 ITPRIPL1Q6GPH6 555 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 THEM5Q8N1Q8 247 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 PPCSQ9HAB8 311 aa13.24□□□□□ -0.29
TPR-201ENST00000367478 hCG_1642624A0A1W2PR95 340 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms