RNA–Protein interactions for RNA: ENST00000367248.7

SYNE1-204, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 7,165 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-204ENST00000367248 FBXO41Q8TF61 875 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 SLC9A2Q9UBY0 812 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 CETPP11597 493 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 SYNDIG1Q9H7V2 258 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 MAD1L1Q9Y6D9 718 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 NEMP1O14524 444 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 RARBP10826 455 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 PALM2Q8IXS6 379 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 BBOF1Q8ND07 529 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 TYW1Q9NV66 732 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 CPA4Q9UI42 421 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 SLC8A2Q9UPR5 921 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 PROM2Q8N271 834 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 CTNND1O60716 968 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 BRD3Q15059 726 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 CCDC170Q8IYT3 715 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 SLC35F6Q8N357 371 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 MB21D1Q8N884 522 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 C2orf40Q9H1Z8 148 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 POLLQ9UGP5 575 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 CDC23Q9UJX2 597 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 KCNV1Q6PIU1 500 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 YAF2Q8IY57 180 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 ANKRD13AQ8IZ07 590 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 GUF1Q8N442 669 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 PDCD6IPQ8WUM4 868 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 TSC1Q92574 1164 aa12.5□□□□□ -0.41
SYNE1-204ENST00000367248 PIN4Q9Y237 131 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 ZC3H13Q5T200 1668 aaKnown RBP12.5□□□□□ -0.41
SYNE1-204ENST00000367248 PDIA5Q14554 519 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 FYB2Q5VWT5 728 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ALKBH5Q6P6C2 394 aaKnown RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 NUDT12Q9BQG2 462 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 PHF20Q9BVI0 1012 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 TRIM49BA6NDI0 452 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ZNF500O60304 480 aaPredicted RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 CYP27A1Q02318 531 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 MAPK8IP2Q13387 824 aaPredicted RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 BBS5Q8N3I7 341 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 GOLPH3LQ9H4A5 285 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 GMNNO75496 209 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 KRT33BQ14525 404 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ACCSLQ4AC99 568 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 DENND2CQ68D51 928 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 RINT1Q6NUQ1 792 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 PGBD3Q8N328 593 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 SMYD2Q9NRG4 433 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ADAMTS1Q9UHI8 967 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ATP8B3O60423 1300 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 PASKQ96RG2 1323 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 GUCY2FP51841 1108 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ANAPC5Q9UJX4 755 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 CTNNA1P35221 906 aaKnown RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 TPD52P55327 224 aaPredicted RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 GPRC5AQ8NFJ5 357 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 A6NNZ2 444 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 CLGNO14967 610 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 SERPING1P05155 500 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 FCGRTP55899 365 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 ERCC6LQ2NKX8 1250 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 TUBB8Q3ZCM7 444 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 KRT12Q99456 494 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 EIF2AK1Q9BQI3 630 aaKnown RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 GBA2Q9HCG7 927 aaPredicted RBP12.49□□□□□ -0.41
SYNE1-204ENST00000367248 DNAJC12Q9UKB3 198 aa12.49□□□□□ -0.41
SYNE1-204ENST00000367248 PDS5AQ29RF7 1337 aaKnown RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 FAM205CA6NFA0 338 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 GGPS1O95749 300 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 ATF2P15336 505 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 GCLMP48507 274 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 STAT5BP51692 787 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 MCUQ8NE86 351 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 ACRBPQ8NEB7 543 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 ALKBH8Q96BT7 664 aaKnown RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 POLR3FQ9H1D9 316 aaPredicted RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 TRPC7Q9HCX4 862 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 PDHBP11177 359 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 ARL4AP40617 200 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 SRGAP1Q7Z6B7 1085 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 ENC1O14682 589 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 TRPA1O75762 1119 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 EYA4O95677 639 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 KNOP1Q1ED39 458 aaKnown RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 FZD1Q9UP38 647 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 USP32Q8NFA0 1604 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 NDUFAB1O14561 156 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 RGL2O15211 777 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 SHC4Q6S5L8 630 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 UHMK1Q8TAS1 419 aaKnown RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 FAM213AQ9BRX8 229 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 CALN1Q9BXU9 219 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 GCOM2Q9BZD3 368 aaPredicted RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 JPH1Q9HDC5 661 aaPredicted RBP12.48□□□□□ -0.41
SYNE1-204ENST00000367248 EFCAB8A8MWE9 144 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 TSPY1Q01534 308 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 LMNB2Q03252 620 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 PSMD6Q15008 389 aa12.48□□□□□ -0.41
SYNE1-204ENST00000367248 CCDC157Q569K6 752 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms