RNA–Protein interactions for RNA: ENST00000367196.3

CTSD-202, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 907 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-202ENST00000367196 Q4G0T1 1027 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 SPOUT1Q5T280 376 aaKnown RBP16.74■□□□□ 0.27
CTSD-202ENST00000367196 MOXD1Q6UVY6 613 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 TRMT1LQ7Z2T5 733 aaKnown RBP16.74■□□□□ 0.27
CTSD-202ENST00000367196 GJD3Q8N144 294 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 TBCKQ8TEA7 893 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 TMEM40Q8WWA1 233 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 OSMRQ99650 979 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 PRKAG3Q9UGI9 489 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 PLAGL2Q9UPG8 496 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 PCDHB12Q9Y5F1 795 aa16.74■□□□□ 0.27
CTSD-202ENST00000367196 ADAMTS3O15072 1205 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 MSH4O15457 936 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 CHMP2AO43633 222 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 VTNP04004 478 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 IBSPP21815 317 aaPredicted RBP16.73■□□□□ 0.27
CTSD-202ENST00000367196 PRKCEQ02156 737 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 UBE3AQ05086 875 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 TMEM31Q5JXX7 168 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 EFCAB12Q6NXP0 572 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 BLIDQ8IZY5 108 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 DAGLBQ8NCG7 672 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 SLC5A5Q92911 643 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 SCLT1Q96NL6 688 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 ELAC1Q9H777 363 aaKnown RBP16.73■□□□□ 0.27
CTSD-202ENST00000367196 ATP6V0A4Q9HBG4 840 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 ALG13Q9NP73 1137 aaKnown RBP16.73■□□□□ 0.27
CTSD-202ENST00000367196 PDRG1Q9NUG6 133 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 TMEM161AQ9NX61 479 aa16.73■□□□□ 0.27
CTSD-202ENST00000367196 FNDC1Q4ZHG4 1894 aaPredicted RBP16.73■□□□□ 0.27
CTSD-202ENST00000367196 GPR32O75388 356 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 ZSCAN20P17040 1043 aaPredicted RBP16.72■□□□□ 0.27
CTSD-202ENST00000367196 CLCN3P51790 818 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 CDC42EP1Q00587 391 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 TBC1D8BQ0IIM8 1120 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 NONOQ15233 471 aaKnown RBP eCLIP16.72■□□□□ 0.27
CTSD-202ENST00000367196 CTC1Q2NKJ3 1217 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 FAM228AQ86W67 206 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 KLHL23Q8NBE8 558 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 PPP1R16BQ96T49 567 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 POP1Q99575 1024 aaKnown RBP16.72■□□□□ 0.27
CTSD-202ENST00000367196 UPF3BQ9BZI7 483 aaKnown RBP16.72■□□□□ 0.27
CTSD-202ENST00000367196 EPHX3Q9H6B9 360 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 HCN4Q9Y3Q4 1203 aa16.72■□□□□ 0.27
CTSD-202ENST00000367196 CYP3A7-CYP3A51PA0A087WV96 503 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 TBKBP1A7MCY6 615 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 C9IYK1 514 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 PI4K2BG5E9Z4 385 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 MGEA5O60502 916 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 ITGB1P05556 798 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 ALADP13716 330 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 CYP3A7P24462 503 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 NLRP11P59045 1033 aaKnown RBP16.71■□□□□ 0.27
CTSD-202ENST00000367196 HYAL1Q12794 435 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 MIER3Q7Z3K6 550 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 KRT25Q7Z3Z0 450 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 SPPL3Q8TCT6 385 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 UNC45AQ9H3U1 944 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 CDHR5Q9HBB8 845 aa16.71■□□□□ 0.27
CTSD-202ENST00000367196 EIF5BO60841 1220 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 GPR37L1O60883 481 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 PSMD10O75832 226 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 LAG3P18627 525 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 EIF4BP23588 611 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 NDUFV1P49821 464 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 DNM2P50570 870 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 STK3Q13188 491 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 SMAD4Q13485 552 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 XKR3Q5GH77 459 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 PDE12Q6L8Q7 609 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 ABI1Q8IZP0 508 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 LRRC71Q8N4P6 559 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 LINC01465Q8N7H1 131 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 POF1BQ8WVV4 589 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 NAP1L4Q99733 375 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 SLKQ9H2G2 1235 aaPredicted RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 SEPT9Q9UHD8 586 aaPredicted RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 DDX25Q9UHL0 483 aaKnown RBP16.7■□□□□ 0.26
CTSD-202ENST00000367196 STK36Q9NRP7 1315 aa16.7■□□□□ 0.26
CTSD-202ENST00000367196 CCDC194A0A1B0GVG4 234 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 ZNF862O60290 1169 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 DKC1O60832 514 aaKnown RBP eCLIP16.69■□□□□ 0.26
CTSD-202ENST00000367196 CSPG5O95196 566 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 GCFC2P16383 781 aaKnown RBP16.69■□□□□ 0.26
CTSD-202ENST00000367196 GATMP50440 423 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 GPC3P51654 580 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 ANKRD1Q15327 319 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 SMAD2Q15796 467 aaKnown RBP16.69■□□□□ 0.26
CTSD-202ENST00000367196 ADHFE1Q8IWW8 467 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 THNSL1Q8IYQ7 743 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 LRRC43Q8N309 656 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 NLRP7Q8WX94 980 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 RSPH1Q8WYR4 309 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 JPH2Q9BR39 696 aaPredicted RBP16.69■□□□□ 0.26
CTSD-202ENST00000367196 LRFN3Q9BTN0 628 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 TMEM117Q9H0C3 514 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 IGFLR1Q9H665 355 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 TLR9Q9NR96 1032 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 DACT1Q9NYF0 836 aa16.69■□□□□ 0.26
CTSD-202ENST00000367196 CD207Q9UJ71 328 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms