RNA–Protein interactions for RNA: ENST00000366897.5

PRKN-205, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,877 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-205ENST00000366897 USP17L10C9JJH3 530 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 AKR1B1P15121 316 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 PLTPP55058 493 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 CYP4A11Q02928 519 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 NEDD9Q14511 834 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 DCAF12L1Q5VU92 463 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 HIBCHQ6NVY1 386 aaPredicted RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 DPP8Q6V1X1 898 aaPredicted RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 ADGRF4Q8IZF3 695 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 C1orf131Q8NDD1 294 aaKnown RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 ATP8B4Q8TF62 1192 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 GCNT4Q9P109 453 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 BAIAP2L1Q9UHR4 511 aa14.78□□□□□ -0.04
PRKN-205ENST00000366897 UTP11Q9Y3A2 253 aaKnown RBP14.78□□□□□ -0.04
PRKN-205ENST00000366897 CNTNAP4Q9C0A0 1308 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 ESYT2A0FGR8 921 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 AFPP02771 609 aaKnown RBP14.77□□□□□ -0.04
PRKN-205ENST00000366897 CHN1P15882 459 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 NF2P35240 595 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 IFI35P80217 286 aaPredicted RBP14.77□□□□□ -0.04
PRKN-205ENST00000366897 PPP1R7Q15435 360 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 CCDC38Q502W7 563 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 CLEC4GQ6UXB4 293 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 XPO6Q96QU8 1125 aaKnown RBP14.77□□□□□ -0.04
PRKN-205ENST00000366897 FMO2Q99518 471 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 LRRC27Q9C0I9 530 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 CCDC113Q9H0I3 377 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 TMOD4Q9NZQ9 345 aa14.77□□□□□ -0.04
PRKN-205ENST00000366897 HGSO14964 777 aaPredicted RBP14.77□□□□□ -0.05
PRKN-205ENST00000366897 FLOT1O75955 427 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 GNA14O95837 355 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 XRCC5P13010 732 aaKnown RBP14.77□□□□□ -0.05
PRKN-205ENST00000366897 ELF1P32519 619 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 SNAP25P60880 206 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 FAM133BQ5BKY9 247 aaKnown RBP14.77□□□□□ -0.05
PRKN-205ENST00000366897 KSR1Q8IVT5 923 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 TCP11Q8WWU5 503 aa14.77□□□□□ -0.05
PRKN-205ENST00000366897 POLD1P28340 1107 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 LNX1Q8TBB1 728 aaPredicted RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 CCT6BQ92526 530 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 ACTR5Q9H9F9 607 aaPredicted RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 COL5A3P25940 1745 aaPredicted RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 RPS6KA4O75676 772 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 MMEP08473 750 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 TM4SF1P30408 202 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 ACCSLQ4AC99 568 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 TRAPPC3LQ5T215 181 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 PALB2Q86YC2 1186 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 CCDC26Q8TAB7 109 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 CALR3Q96L12 384 aaKnown RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 REEP2Q9BRK0 252 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 FHDC1Q9C0D6 1143 aaPredicted RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 AZI2Q9H6S1 392 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 ZNF287Q9HBT7 754 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 A1CFQ9NQ94 594 aaKnown RBP14.76□□□□□ -0.05
PRKN-205ENST00000366897 TAS2R14Q9NYV8 317 aa14.76□□□□□ -0.05
PRKN-205ENST00000366897 KRT13P13646 458 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 MARSP56192 900 aaKnown RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 PPP4CP60510 307 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 MTMR3Q13615 1198 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 PLCB4Q15147 1175 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 AGBL2Q5U5Z8 902 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 PNMA8AQ86V59 439 aaPredicted RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 SLC35G2Q8TBE7 412 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 FBXO25Q8TCJ0 367 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 ARHGEF1Q92888 912 aaKnown RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 ARHGEF26Q96DR7 871 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 CHMP6Q96FZ7 201 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 ELAC2Q9BQ52 826 aaKnown RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 DHX36Q9H2U1 1008 aaKnown RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 PSTPIP2Q9H939 334 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 SIX2Q9NPC8 291 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.75□□□□□ -0.051e-8■■■■■ 226.9
PRKN-205ENST00000366897 MTMR4Q9NYA4 1195 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 STXBP5LQ9Y2K9 1186 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 CD2APQ9Y5K6 639 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 IRS2Q9Y4H2 1338 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 TMEM110-MUSTN1A8MSY1 372 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 CLTAP09496 248 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 GSTO1P78417 241 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 EPHA7Q15375 998 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 IFI16Q16666 785 aaKnown RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 LRRC34Q8IZ02 419 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 RNF25Q96BH1 459 aaPredicted RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 EPB41L4BQ9H329 900 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 GGA2Q9UJY4 613 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 FOXO6A8MYZ6 492 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 CCDC188H7C350 402 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 EVI5O60447 810 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 SLC10A5Q5PT55 438 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 ARHGAP27Q6ZUM4 889 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 TBC1D1Q86TI0 1168 aaPredicted RBP14.75□□□□□ -0.05
PRKN-205ENST00000366897 AMFRQ9UKV5 643 aa14.75□□□□□ -0.05
PRKN-205ENST00000366897 C5orf60A6NFR6 353 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 VIMP08670 466 aaKnown RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 DR1Q01658 176 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 DRP2Q13474 957 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SLC29A2Q14542 456 aa14.74□□□□□ -0.05
PRKN-205ENST00000366897 SHROOM1Q2M3G4 852 aaPredicted RBP14.74□□□□□ -0.05
PRKN-205ENST00000366897 PRR16Q569H4 304 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 87.1 ms