RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 GPSM2P81274 684 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 PREPLQ4J6C6 727 aaPredicted RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 GKAP1Q5VSY0 366 aaPredicted RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 CATSPER3Q86XQ3 398 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 LRRC47Q8N1G4 583 aaKnown RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 ATP8B4Q8TF62 1192 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 TMEM174Q8WUU8 243 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 RAPGEF5Q92565 580 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 GPCPD1Q9NPB8 672 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 ZDHHC18Q9NUE0 388 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 TBC1D7Q9P0N9 293 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 GGA1Q9UJY5 639 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 DAGLAQ9Y4D2 1042 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 GOLGA6L10A0A0M3HER8 536 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 ASAP2O43150 1006 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 DAPK3O43293 454 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 AKAP3O75969 853 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 GGPS1O95749 300 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SPATA31C1P0DKV0 1188 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SOX5P35711 763 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 ITIH4Q14624 930 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 NBPF9Q3BBW0 867 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 MFSD14BQ5SR56 506 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 BTNL9Q6UXG8 535 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 UBLCP1Q8WVY7 318 aaPredicted RBP13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SGSM3Q96HU1 749 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 FMO2Q99518 471 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 REEP2Q9BRK0 252 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 OSBPL7Q9BZF2 842 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SLC40A1Q9NP59 571 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 SERPINB13Q9UIV8 391 aa13.9□□□□□ -0.18
CAPN8-201ENST00000366872 PFASO15067 1338 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 EYA4O95677 639 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 DRD4P21917 467 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 HPDP32754 393 aaPredicted RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 CASP5P51878 434 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 MYBPC2Q14324 1141 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PLS1Q14651 629 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 DPP8Q6V1X1 898 aaPredicted RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 SFR1Q86XK3 245 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 RUNDC3BQ96NL0 473 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 ERP44Q9BS26 406 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PPANQ9NQ55 473 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 GCNT4Q9P109 453 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 SEL1LQ9UBV2 794 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PARP2Q9UGN5 583 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 AMACRQ9UHK6 382 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 UBR3Q6ZT12 1888 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 NPHP3-ACAD11A0A0J9YXS1 232 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 MIF4GDA9UHW6 222 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PPP1R12BO60237 982 aaPredicted RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 BBOX1O75936 387 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 ERCC3P19447 782 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 SHMT1P34896 483 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 MAP2K2P36507 400 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 GALCP54803 685 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 DHX9Q08211 1270 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PPP2R5AQ15172 486 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 RNF187Q5TA31 235 aaPredicted RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 DAAM2Q86T65 1068 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 MORC4Q8TE76 937 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 CCT6BQ92526 530 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 XPO6Q96QU8 1125 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 AP1M1Q9BXS5 423 aa13.89□□□□□ -0.19
CAPN8-201ENST00000366872 PABPC3Q9H361 631 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 CNOT8Q9UFF9 292 aaKnown RBP13.89□□□□□ -0.19
CAPN8-201ENST00000366872 CCDC169A6NNP5 214 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 TTI1O43156 1089 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 UFL1O94874 794 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 CYP3A4P08684 503 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 PSMC2P35998 433 aaKnown RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 SREBF1P36956 1147 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 MMP13P45452 471 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 DNA2P51530 1060 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 TNFAIP8L3Q5GJ75 292 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 C11orf63Q6NUN7 778 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 DDX42Q86XP3 938 aaKnown RBP eCLIP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 COL23A1Q86Y22 540 aaPredicted RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 RHOT2Q8IXI1 618 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 FUKQ8N0W3 1084 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 LNX1Q8TBB1 728 aaPredicted RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 ARHGEF1Q92888 912 aaKnown RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 LENG9Q96B70 501 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 CHMP6Q96FZ7 201 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 RASAL2Q9UJF2 1139 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 NOVA2Q9UNW9 492 aaKnown RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 THSD7AQ9UPZ6 1657 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 SYNGAP1Q96PV0 1343 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 POTEFA5A3E0 1075 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 USP17L10C9JJH3 530 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 MEIS2O14770 477 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 GNPATO15228 680 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 POTEIP0CG38 1075 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 ITGA4P13612 1032 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 HOXA10P31260 410 aaPredicted RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 RNASE9P60153 205 aaKnown RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 MAGOHP61326 146 aaKnown RBP13.88□□□□□ -0.19
CAPN8-201ENST00000366872 ARHGAP4P98171 946 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 KRT71Q3SY84 523 aa13.88□□□□□ -0.19
CAPN8-201ENST00000366872 POTEGQ6S5H5 508 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms