RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PMS2P54278 862 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 RASA3Q14644 834 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 STRIP2Q9ULQ0 834 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 RNF168Q8IYW5 571 aaPredicted RBP12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 SOX5P35711 763 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 COA1Q9GZY4 146 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZNF18P17022 549 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 KPNA2P52292 529 aaKnown RBP12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 ARL4CP56559 192 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 MCPH1Q8NEM0 835 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 CNKSR1Q969H4 720 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 POTEMA6NI47 508 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 EFHD1Q9BUP0 239 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 POC1B-GALNT4F8VUJ3 575 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 FOXN1O15353 648 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 HACE1Q8IYU2 909 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 DAGLBQ8NCG7 672 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRIM55Q9BYV6 548 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 KMT5AQ9NQR1 393 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 DNAJC12Q9UKB3 198 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 SUSD4Q5VX71 490 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 MMS19Q96T76 1030 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 MINPP1Q9UNW1 487 aa12.67□□□□□ -0.38
CDC42BPA-202ENST00000366764 TFDP1Q14186 410 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 RASIP1Q5U651 963 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 CDKAL1Q5VV42 579 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZC3H15Q8WU90 426 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 NAB2Q15742 525 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 HLFQ16534 295 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 NLGN1Q8N2Q7 840 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 LARGE2Q8N3Y3 721 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 TXNDC9O14530 226 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 CASP1P29466 404 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 E2F5Q15329 346 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 KLHL38Q2WGJ6 581 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 NIM1KQ8IY84 436 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 TIPINQ9BVW5 301 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 NRBP2Q9NSY0 501 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 AXIN2Q9Y2T1 843 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 FAM133BQ5BKY9 247 aaKnown RBP12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 DYNLL2Q96FJ2 89 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 SNF8Q96H20 258 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 STK33Q9BYT3 514 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 RAB21Q9UL25 225 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 ADRA2BP18089 450 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 IRAK1P51617 712 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 EPM2AIP1Q7L775 607 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 COA7Q96BR5 231 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 TESPA1A2RU30 521 aaPredicted RBP12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 HINFPQ9BQA5 517 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 TTI1O43156 1089 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZRANB2O95218 330 aaKnown RBP eCLIP12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 ANKRD40Q6AI12 368 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 SERPINI1Q99574 410 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 KRT19P08727 400 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 KCTD1Q719H9 257 aa12.66□□□□□ -0.38
CDC42BPA-202ENST00000366764 PPP1R3GB7ZBB8 358 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 RASA4BC9J798 803 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 RASA4O43374 803 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 CPP00450 1065 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 KRT1P04264 644 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 APLFQ8IW19 511 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 ADPGKQ9BRR6 497 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 TBX3O15119 743 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 TBXAS1P24557 533 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 CHP1Q99653 195 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 FBXL5Q9UKA1 691 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 GUCY1A2P33402 732 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 SLCO1A2P46721 670 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 NSMCE1Q8WV22 266 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 A6NJR5 290 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 UBAP1LF5GYI3 381 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 PAPD7Q5XG87 772 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 CEP120Q8N960 986 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 RNPC3Q96LT9 517 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 PITPNM2Q9BZ72 1349 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 PPEF1O14829 653 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 SEPT14Q6ZU15 432 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 PYROXD1Q8WU10 500 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 LRRC1Q9BTT6 524 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 L1RE1Q9UN81 338 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 BZW1Q7L1Q6 419 aaKnown RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 ST7Q9NRC1 585 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 CYP19A1P11511 503 aaPredicted RBP12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 SCARF1Q14162 830 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 ZNF354CQ86Y25 554 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 GLG1Q92896 1179 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 TRAIPQ9BWF2 469 aa12.65□□□□□ -0.38
CDC42BPA-202ENST00000366764 KRT38O76015 456 aa12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 PLA2G4AP47712 749 aa12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 PDIA6Q15084 440 aa12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 RPUSD2Q8IZ73 545 aaKnown RBP12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 NLRP7Q8WX94 980 aa12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 SMG5Q9UPR3 1016 aaKnown RBP12.65□□□□□ -0.39
CDC42BPA-202ENST00000366764 ZNF233A6NK53 670 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 USP17L5A8MUK1 530 aa12.64□□□□□ -0.39
CDC42BPA-202ENST00000366764 CDH16O75309 829 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms