RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 TNMDQ9H2S6 317 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 TSPY26PQ9H489 355 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 GRPEL1Q9HAV7 217 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 HDAC6Q9UBN7 1215 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 CD207Q9UJ71 328 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 FBXO2Q9UK22 296 aaPredicted RBP12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 HPSEQ9Y251 543 aa12.66□□□□□ -0.38
CSNK1E-202ENST00000366216 KINO60870 393 aaKnown RBP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 PPP1R11O60927 126 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 LINC00271P0C7V0 271 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 GTF2F1P35269 517 aaKnown RBP eCLIP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 ADCY7P51828 1080 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 NDUFA8P51970 172 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 ATP2C1P98194 919 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 TRAF1Q13077 416 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 ORC2Q13416 577 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 CDC37Q16543 378 aaPredicted RBP12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 LY6KQ17RY6 165 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 QRICH1Q2TAL8 776 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 SHC4Q6S5L8 630 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 TEX2Q8IWB9 1127 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 TOP1MTQ969P6 601 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 TIGD1Q96MW7 591 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 FUCA2Q9BTY2 467 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 RIC8AQ9NPQ8 531 aa12.65□□□□□ -0.38
CSNK1E-202ENST00000366216 EP300Q09472 2414 aaPredicted RBP12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 A0A1B0GVL5 298 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 LOC730098B7Z3J9 87 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 H0Y858 1186 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 UPP2O95045 317 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 PFKFB1P16118 471 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 ATP2B1P20020 1258 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 AVPR2P30518 371 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 MRPL12P52815 198 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 SIGLEC14Q08ET2 396 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 NONOQ15233 471 aaKnown RBP eCLIP12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 ZNF174Q15697 407 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 ARL6IP4Q66PJ3 421 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 RNF207Q6ZRF8 634 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 ASCL5Q7RTU5 278 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 REXO1Q8N1G1 1221 aaKnown RBP12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 DBF4BQ8NFT6 615 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 RASGRP4Q8TDF6 673 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 LMAN2LQ9H0V9 348 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 TLR9Q9NR96 1032 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
CSNK1E-202ENST00000366216 B4DLN1 442 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 C5orf67F2Z3F1 127 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 HAS3O00219 553 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 LAD1O00515 517 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 WNT7AO00755 349 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 GRM6O15303 877 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 LINC01565O15544 149 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 ZNF202O95125 648 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 GH1P01241 217 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 CTNNB1P35222 781 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 SYKP43405 635 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 CLK2P49760 499 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 PSEN2P49810 448 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 NUBP1P53384 320 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 PTGDRQ13258 359 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 DGKDQ16760 1214 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 PLEKHG4Q58EX7 1191 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 MCTP2Q6DN12 878 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 ELOA2Q8IYF1 753 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 DNERQ8NFT8 737 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 CUL5Q93034 780 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 ASIC4Q96FT7 647 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 CLIC6Q96NY7 704 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 C11orf84Q9BUA3 381 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 KATNAL1Q9BW62 490 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 AMNQ9BXJ7 453 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 IGFLR1Q9H665 355 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 FAM13BQ9NYF5 915 aa12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 FNDC1Q4ZHG4 1894 aaPredicted RBP12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 TPRP12270 2363 aaKnown RBP12.63□□□□□ -0.39
CSNK1E-202ENST00000366216 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 PRR23AA6NEV1 266 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 EYA4O95677 639 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 CCDC192P0DO97 292 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 XRCC6P12956 609 aaKnown RBP eCLIP12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 ID4P47928 161 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 ADAM15Q13444 863 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 MFSD10Q14728 455 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 CBX2Q14781 532 aaPredicted RBP12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 CAMK4Q16566 473 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 INF2Q27J81 1249 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 NEK8Q86SG6 692 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 C4orf32Q8N8J7 132 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 MSLNLQ96KJ4 702 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 IFIH1Q9BYX4 1025 aaKnown RBP12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 RBSNQ9H1K0 784 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 PSTPIP2Q9H939 334 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 PCDHA1Q9Y5I3 950 aa12.62□□□□□ -0.39
CSNK1E-202ENST00000366216 RSPH10B2B2RC85 870 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 F2P00734 622 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 RB1P06400 928 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 RSPH10BP0C881 870 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 ZNF286BP0CG31 522 aa12.61□□□□□ -0.39
CSNK1E-202ENST00000366216 MCM7P33993 719 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms