RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 HNRNPDLO14979 420 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 FOSP01100 380 aaPredicted RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 CCDC137Q6PK04 289 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 METTL13Q8N6R0 699 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 MAIP1Q8WWC4 291 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 RIMS1Q86UR5 1692 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 FAM237AA0A1B0GTK4 181 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 ZBTB5O15062 677 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 SLC37A4O43826 429 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 SMIM24O75264 130 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 BFSP1Q12934 665 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 RCN2Q14257 317 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 PPP2R5DQ14738 602 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 NAB2Q15742 525 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 GRK7Q8WTQ7 553 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 DUSP9Q99956 384 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 DHX36Q9H2U1 1008 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 VCXQ9H320 206 aa14.99□□□□□ -0.01
COL6A1-201ENST00000361866 NOP53Q9NZM5 478 aaKnown RBP14.99□□□□□ -0.01
COL6A1-201ENST00000361866 MEGF6O75095 1541 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 ARHGAP42A6NI28 874 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 KRT19P08727 400 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 EVX2Q03828 476 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 WDR59Q6PJI9 974 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 FAM196AQ6ZSG2 479 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 CREG2Q8IUH2 290 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 ANKRD35Q8N283 1001 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 NEDD1Q8NHV4 660 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 NKX2-3Q8TAU0 364 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 CNKSR2Q8WXI2 1034 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 DDX23Q9BUQ8 820 aaKnown RBP14.98□□□□□ -0.01
COL6A1-201ENST00000361866 EDEM3Q9BZQ6 932 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TRIM6Q9C030 488 aaPredicted RBP14.98□□□□□ -0.01
COL6A1-201ENST00000361866 YIPF3Q9GZM5 350 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 ETNK1Q9HBU6 452 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 PDHA1P08559 390 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 STRN3Q13033 797 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TRPC3Q13507 836 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 QRICH1Q2TAL8 776 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 NAALADL2Q58DX5 795 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 CASC4Q6P4E1 433 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TLR10Q9BXR5 811 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 RAB20Q9NX57 234 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 ANAPC7Q9UJX3 599 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 STK24Q9Y6E0 443 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 LRRC10BA6NIK2 292 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 SLC35G2Q8TBE7 412 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 RSAD2Q8WXG1 361 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TEKT3Q9BXF9 490 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 CD209Q9NNX6 404 aa14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TRPC5Q9UL62 973 aaPredicted RBP14.98□□□□□ -0.01
COL6A1-201ENST00000361866 TCP11X1B4DZS4 312 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RASA4BC9J798 803 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RASA4O43374 803 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 EVI5O60447 810 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 TRIM37O94972 964 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RWDD2BP57060 319 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 SH3RF1Q7Z6J0 888 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 CCDC110Q8TBZ0 833 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 REXO2Q9Y3B8 237 aaKnown RBP14.97□□□□□ -0.01
COL6A1-201ENST00000361866 DIP2BQ9P265 1576 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 SGK1O00141 431 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 GAP43P17677 238 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 MFAP3P55082 362 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 CFAP157Q5JU67 520 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RPUSD2Q8IZ73 545 aaKnown RBP14.97□□□□□ -0.01
COL6A1-201ENST00000361866 SLITRK6Q9H5Y7 841 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 EPHB6O15197 1021 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 FOXP2O15409 715 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 FGFR2P21802 821 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 LONRF1Q17RB8 773 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RASIP1Q5U651 963 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 KIAA0895Q8NCT3 520 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RFFLQ8WZ73 363 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 SPDL1Q96EA4 605 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 A0A1W2PQJ5 194 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 LRRD1A4D1F6 860 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RASA1P20936 1047 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 RHOT2Q8IXI1 618 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 SUPT20HQ8NEM7 779 aa14.97□□□□□ -0.01
COL6A1-201ENST00000361866 XPO6Q96QU8 1125 aaKnown RBP14.97□□□□□ -0.01
COL6A1-201ENST00000361866 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.97□□□□□ -0.01
COL6A1-201ENST00000361866 CLRN2A0PK11 232 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 I3L4J1 428 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 PODXLO00592 558 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 MYBP10242 640 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 HSPA6P17066 643 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 GRB10Q13322 594 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 SLC29A2Q14542 456 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 NBPF9Q3BBW0 867 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 KLHDC7AQ5VTJ3 777 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 NACC1Q96RE7 527 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 SPZ1Q9BXG8 430 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 STK32BQ9NY57 414 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 CNOT8Q9UFF9 292 aaKnown RBP14.96□□□□□ -0.01
COL6A1-201ENST00000361866 DCTN4Q9UJW0 460 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 GOLGA8SH3BPF8 625 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 GOLGA8MH3BSY2 632 aa14.96□□□□□ -0.01
COL6A1-201ENST00000361866 hCG_1984214I3L0E3 225 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms