RNA–Protein interactions for RNA: ENST00000361716.7

VAMP1-201, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best) BASIC

Gene VAMP1, Length 3,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-201ENST00000361716 STX2P32856 288 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 TRAPPC10P48553 1259 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 TSNAXIP1Q2TAA8 658 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 ZC3H18Q86VM9 953 aaKnown RBP13.74□□□□□ -0.21
VAMP1-201ENST00000361716 SEMA4AQ9H3S1 761 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 SIK3Q9Y2K2 1263 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 NR2E1Q9Y466 385 aa13.74□□□□□ -0.21
VAMP1-201ENST00000361716 PNPLA7Q6ZV29 1317 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 C5orf60A6NFR6 353 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 RASGRF2O14827 1237 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 LDHBP07195 334 aaKnown RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 FERP16591 822 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 SLMAPQ14BN4 828 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF513Q8N8E2 541 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 SH3RF3Q8TEJ3 882 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 EZH1Q92800 747 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 RAB17Q9H0T7 212 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 SLC12A4Q9UP95 1085 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 CREB1P16220 341 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 VPS41P49754 854 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 DR1Q01658 176 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 ARL6IP4Q66PJ3 421 aaKnown RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF572Q7Z3I7 529 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 TXNRD3Q86VQ6 643 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 KIAA0895Q8NCT3 520 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 FBXO25Q8TCJ0 367 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 LRRC15Q8TF66 581 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 CCDC87Q9NVE4 849 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 CHORDC1Q9UHD1 332 aaPredicted RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 ATP6V0A2Q9Y487 856 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 AFF2P51816 1311 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 A0A1W2PQJ5 194 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 ECHS1P30084 290 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 PRPHP41219 470 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 CYP4A11Q02928 519 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 CWF19L1Q69YN2 538 aaKnown RBP13.73□□□□□ -0.21
VAMP1-201ENST00000361716 SYCP3Q8IZU3 236 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 DTX3LQ8TDB6 740 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 NUDT12Q9BQG2 462 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 TMEM165Q9HC07 324 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 HAO1Q9UJM8 370 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 KIAA1024Q9UPX6 916 aa13.73□□□□□ -0.21
VAMP1-201ENST00000361716 SFI1A8K8P3 1242 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 CETN3O15182 167 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 CLIC2O15247 247 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 GNA11P29992 359 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF131P52739 623 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF268Q14587 947 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-201ENST00000361716 TBC1D10BQ4KMP7 808 aaPredicted RBP13.72□□□□□ -0.21
VAMP1-201ENST00000361716 MYOCDQ8IZQ8 938 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 BAP1Q92560 729 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 TMEM47Q9BQJ4 181 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 MINPP1Q9UNW1 487 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 E9PMD0 336 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 TLR2O60603 784 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 PLCG2P16885 1265 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 RCN2Q14257 317 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 SLC18A3Q16572 532 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 ALKBH5Q6P6C2 394 aaKnown RBP13.72□□□□□ -0.21
VAMP1-201ENST00000361716 EYA3Q99504 573 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 RAB34Q9BZG1 259 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 TMOD4Q9NZQ9 345 aa13.72□□□□□ -0.21
VAMP1-201ENST00000361716 RTCBQ9Y3I0 505 aaKnown RBP13.72□□□□□ -0.21
VAMP1-201ENST00000361716 AHCYL1O43865 530 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 GSTA1P08263 222 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 GNAQP50148 359 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SCNN1BP51168 640 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 CDK17Q00537 523 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 PTK2Q05397 1052 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 ADAM9Q13443 819 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SETDB1Q15047 1291 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 PDCD2Q16342 344 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 EAPPQ56P03 285 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SPATA21Q7Z572 469 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 FGD4Q96M96 766 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 ZNF317Q96PQ6 595 aaPredicted RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 EPAS1Q99814 870 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 FAM114A2Q9NRY5 505 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 AFDNP55196 1824 aaKnown RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 PAPPAQ13219 1627 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SNX3O60493 162 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 SNAP25P60880 206 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 KLC1Q07866 573 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 CUL3Q13618 768 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 ITIH4Q14624 930 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 FITM2Q8N6M3 262 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 NSUN4Q96CB9 384 aaKnown RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 GBP5Q96PP8 586 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 DDX50Q9BQ39 737 aaKnown RBP13.71□□□□□ -0.21
VAMP1-201ENST00000361716 VCXQ9H320 206 aa13.71□□□□□ -0.21
VAMP1-201ENST00000361716 PHLPP1O60346 1717 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 UBR2Q8IWV8 1755 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 CYTH3O43739 400 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 PPFIA2O75334 1257 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 RPS8P62241 208 aaKnown RBP13.71□□□□□ -0.22
VAMP1-201ENST00000361716 ARHGAP44Q17R89 818 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 FAM26FQ5R3K3 315 aa13.71□□□□□ -0.22
VAMP1-201ENST00000361716 AADACL2Q6P093 401 aa13.71□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms