RNA–Protein interactions for RNA: ENST00000360668.7

MAP1LC3A-201, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3A, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-201ENST00000360668 LGR5O75473 907 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 GCNT3O95395 438 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 MYBP10242 640 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ATP4AP20648 1035 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 TCF7P36402 384 aaPredicted RBP23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NR1I3Q14994 352 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ODR4Q5SWX8 454 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 FAM178BQ8IXR5 827 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 SPATA33Q96N06 139 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 CYP26B1Q9NR63 512 aa23.17■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NOP56O00567 594 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 DGAT1O75907 488 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PLS3P13797 630 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 STAT5BP51692 787 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 IRF5Q13568 498 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 KNOP1Q1ED39 458 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ZNF720Q7Z2F6 126 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NELFCDQ8IXH7 590 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 USP6NLQ92738 828 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 SH2D3AQ9BRG2 576 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NIFKQ9BYG3 293 aaKnown RBP23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ABHD16BQ9H3Z7 469 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 TSKSQ9UJT2 592 aa23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP23.16■■□□□ 1.3
MAP1LC3A-201ENST00000360668 FKBP3Q00688 224 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 LAMC2Q13753 1193 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 EDRF1Q3B7T1 1238 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 HSDL1Q3SXM5 330 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 TRMT1LQ7Z2T5 733 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 VSTM4Q8IW00 320 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 COPS5Q92905 334 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 AZI2Q9H6S1 392 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 RTN4Q9NQC3 1192 aaKnown RBP23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PDLIM7Q9NR12 457 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NRBP2Q9NSY0 501 aa23.15■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PRPF6O94906 941 aaKnown RBP23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 GH1P01241 217 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NMT1P30419 496 aaKnown RBP23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 COPB1P53618 953 aaKnown RBP23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ARHGAP1Q07960 439 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 ALCAMQ13740 583 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 LRRC55Q6ZSA7 311 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 MAEAQ7L5Y9 396 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PLPPR4Q7Z2D5 763 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 TMC6Q7Z403 805 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 SLC17A8Q8NDX2 589 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 MCPH1Q8NEM0 835 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 SOCS4Q8WXH5 440 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 KIFAP3Q92845 792 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 EMID1Q96A84 441 aaPredicted RBP23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 FAM167AQ96KS9 214 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 CEP63Q96MT8 703 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 NRBP1Q9UHY1 535 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 TRAF3IP3Q9Y228 551 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PPME1Q9Y570 386 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PCDHB13Q9Y5F0 798 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 EMSYQ7Z589 1322 aa23.14■■□□□ 1.3
MAP1LC3A-201ENST00000360668 PDXKO00764 312 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 HOXD13P35453 343 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ACVR2BQ13705 512 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 FAM102BQ5T8I3 360 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CCDC186Q7Z3E2 898 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ZC3H3Q8IXZ2 948 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CNOT6LQ96LI5 555 aaKnown RBP23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 STRA6Q9BX79 667 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ATP6V0A4Q9HBG4 840 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 RNF186Q9NXI6 227 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 DOCK3Q8IZD9 2030 aa23.14■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CALUO43852 315 aaPredicted RBP23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 RGS2P41220 211 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CCDC144BQ3MJ40 725 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ST6GALNAC4Q9H4F1 302 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 C17orf75Q9HAS0 396 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TYW1Q9NV66 732 aaKnown RBP23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SAGE1Q9NXZ1 904 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TAB2Q9NYJ8 693 aa23.13■■□□□ 1.29
MAP1LC3A-201ENST00000360668 NKRFO15226 690 aaKnown RBP eCLIP23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 PPP1R37O75864 691 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 ADCYAP1R1P41586 468 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SLC26A2P50443 739 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GSDMDP57764 484 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 MTERF2Q49AM1 385 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TMEM63BQ5T3F8 832 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 IQSEC1Q6DN90 963 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GJD2Q9UKL4 321 aa23.12■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TNPO2O14787 897 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 N4BP3O15049 544 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TRPA1O75762 1119 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 PTGS1P23219 599 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 RTP1P59025 263 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 TARBP2Q15633 366 aaKnown RBP23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 DUSP28Q4G0W2 176 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 OLFML2BQ68BL8 750 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 FILIP1Q7Z7B0 1213 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 CREBRFQ8IUR6 639 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 PPTC7Q8NI37 304 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 BBXQ8WY36 941 aaPredicted RBP23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 GLG1Q92896 1179 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 APBA2Q99767 749 aa23.11■■□□□ 1.29
MAP1LC3A-201ENST00000360668 SMARCAD1Q9H4L7 1026 aa23.11■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms