RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 FTOQ9C0B1 505 aaKnown RBP eCLIP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRIQ3A6PVS8 624 aaPredicted RBP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 SERPING1P05155 500 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 C4BPBP20851 252 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 SF3B3Q15393 1217 aaKnown RBP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 ARMCX6Q7L4S7 300 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 HORMAD1Q86X24 394 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 WDR11Q9BZH6 1224 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 AKT3Q9Y243 479 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC195A0A1B0GUA6 201 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 PRPSAP2O60256 369 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 PFKFB2O60825 505 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 FBLN1P23142 703 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 EIF4A3P38919 411 aaKnown RBP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 EFTUD2Q15029 972 aaKnown RBP eCLIP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 SUPT20HL1Q3ZLR7 823 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 PDIK1LQ8N165 341 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 KBTBD3Q8NAB2 608 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 SUGT1Q9Y2Z0 365 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 AP3B1O00203 1094 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 OR52Z1P0C646 297 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 LONP2Q86WA8 852 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC103Q8IW40 242 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 THEM5Q8N1Q8 247 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 C14orf93Q9H972 538 aaKnown RBP14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 NPATQ14207 1427 aa14.08□□□□□ -0.16
SRGAP3-201ENST00000360413 DMPKQ09013 629 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PPP4R3CPQ6ZMV5 832 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PPP2R3CQ969Q6 453 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC127Q96BQ5 260 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 BRD8Q9H0E9 1235 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT37O76014 449 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 HSPA2P54652 639 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 KRT31Q15323 416 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CMTR1Q8N1G2 835 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 SPATA5Q8NB90 893 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 DIS3Q9Y2L1 958 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 A0A1W2PQ27 194 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 A0A1W2PQ64 194 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 A0A1W2PQD8 194 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 VCPP55072 806 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 ASPRV1Q53RT3 343 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PLEKHM3Q6ZWE6 761 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 BLIDQ8IZY5 108 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 GCOM2Q9BZD3 368 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CFAP69A5D8W1 941 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CAV1Q03135 178 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 RRM2BQ7LG56 351 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 EPN3Q9H201 632 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 ARIH1Q9Y4X5 557 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PCDHA5Q9Y5H7 936 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 MED23Q9ULK4 1368 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 SERPINB4P48594 390 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PTGDRQ13258 359 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 E4F1Q66K89 784 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 TOGARAM2Q6ZUX3 1019 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CCNYQ8ND76 341 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 DTX3LQ8TDB6 740 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CCDC17Q96LX7 622 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 SLC7A5P2Q9GIP4 190 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 SRGAP2O75044 1071 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 SH3TC2Q8TF17 1288 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 DHTKD1Q96HY7 919 aaPredicted RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 CARD9Q9H257 536 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 FGGP02679 453 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PSMC2P35998 433 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 BBS9Q3SYG4 887 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 TUBGCP3Q96CW5 907 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 ATP6V1G3Q96LB4 118 aa14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 DDX50Q9BQ39 737 aaKnown RBP14.07□□□□□ -0.16
SRGAP3-201ENST00000360413 PGM1P36871 562 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 MLH1P40692 756 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 IMPG1Q17R60 797 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 LRRC36Q1X8D7 754 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 MEI1Q5TIA1 1274 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 RBM46Q8TBY0 533 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 SAYSD1Q9NPB0 183 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 GCNT4Q9P109 453 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 INPP5FQ9Y2H2 1132 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 MYH9P35579 1960 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 TJP3O95049 919 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 HIC1Q14526 733 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 SLFN12LQ6IEE8 588 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 KPNA7A9QM74 516 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 CTIFO43310 598 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 KCNA1Q09470 495 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 FBXO11Q86XK2 927 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 XAGE2Q96GT9 111 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 PPP1R2P1Q96PQ5 205 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 FSD1LQ9BXM9 530 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 A0A087WWV3 80 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 PPIP5K2O43314 1243 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 MRPS35P82673 323 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 TRIM16LQ309B1 348 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 EAPPQ56P03 285 aaPredicted RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 DDX17Q92841 729 aaKnown RBP14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 ARFIP2P53365 341 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 GADL1Q6ZQY3 521 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 MAN1B1Q9UKM7 699 aa14.06□□□□□ -0.16
SRGAP3-201ENST00000360413 ABCC12Q96J65 1359 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms