RNA–Protein interactions for RNA: ENST00000359785.9

PTPN22-201, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PTPN22, Length 3,654 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-201ENST00000359785 NAP1L4Q99733 375 aaKnown RBP4.92□□□□□ -1.62
PTPN22-201ENST00000359785 RBM12Q9NTZ6 932 aaKnown RBP4.92□□□□□ -1.62
PTPN22-201ENST00000359785 TXLNGQ9NUQ3 528 aa4.92□□□□□ -1.62
PTPN22-201ENST00000359785 CHCHD3Q9NX63 227 aaKnown RBP4.92□□□□□ -1.62
PTPN22-201ENST00000359785 MCM9Q9NXL9 1143 aa4.92□□□□□ -1.62
PTPN22-201ENST00000359785 ARL2BPQ9Y2Y0 163 aa4.92□□□□□ -1.62
PTPN22-201ENST00000359785 PATJQ8NI35 1801 aa4.92□□□□□ -1.62
PTPN22-201ENST00000359785 PODXLO00592 558 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 KIF4AO95239 1232 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SETSIPP0DME0 302 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 NLRP6P59044 892 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SAFBQ15424 915 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SIX1Q15475 284 aaPredicted RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PROSER3Q2NL68 480 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ANKRD20A2Q5SQ80 823 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CCDC122Q5T0U0 273 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 STXBP5Q5T5C0 1151 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ANKRD20A1Q5TYW2 823 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ANKRD20A3Q5VUR7 823 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CGB2Q6NT52 195 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CHSY1Q86X52 802 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 DZIP3Q86Y13 1208 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 C12orf56Q8IXR9 622 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 DIS3L2Q8IYB7 885 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SLC35B4Q969S0 331 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MTMR9Q96QG7 549 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MAF1Q9H063 256 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 LRRC19Q9H756 370 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PCDHA6Q9UN73 950 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SORCS3Q9UPU3 1222 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 USP15Q9Y4E8 981 aaPredicted RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CYP3A7-CYP3A51PA0A087WV96 503 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CCDC169A6NNP5 214 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 POLR2DO15514 142 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 FAM189A1O60320 539 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SORBS3O60504 671 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ANP32DO95626 131 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ATP2A2P16615 1042 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PTPN2P17706 415 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PROZP22891 400 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PAX7P23759 505 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CYP3A7P24462 503 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MAN1A1P33908 653 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PRCPP42785 496 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CLK2P49760 499 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SLC45A4Q5BKX6 768 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SPECC1Q5M775 1068 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 ZNF276Q8N554 614 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SCFD1Q8WVM8 642 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CRYGNQ8WXF5 182 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MTMR8Q96EF0 704 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PTCD3Q96EY7 689 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 NAF1Q96HR8 494 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 IWS1Q96ST2 819 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MKNK1Q9BUB5 465 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 IFIH1Q9BYX4 1025 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 QPCTLQ9NXS2 382 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PTTG2Q9NZH5 202 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 CDH7Q9ULB5 785 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PLAAQ9Y263 795 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 UMODL1Q5DID0 1318 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 MIF4GDA9UHW6 222 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SMAPO00193 183 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 FOXN1O15353 648 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 GPAA1O43292 621 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 TMEM253P0C7T8 217 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 DHRS4L1P0CG22 281 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 AP1B1Q10567 949 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PDCLQ13371 301 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 GIT2Q14161 759 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 TMCO4Q5TGY1 634 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 SND1Q7KZF4 910 aaKnown RBP eCLIP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 HAUS6Q7Z4H7 955 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 FRMD5Q7Z6J6 570 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 RBM15BQ8NDT2 890 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 AGAP11Q8TF27 550 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 BTBD9Q96Q07 612 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 UBAC1Q9BSL1 405 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 STRA6Q9BX79 667 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 STX18Q9P2W9 335 aaKnown RBP4.91□□□□□ -1.62
PTPN22-201ENST00000359785 DNM3Q9UQ16 869 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PCDHB6Q9Y5E3 794 aa4.91□□□□□ -1.62
PTPN22-201ENST00000359785 PLXNA1Q9UIW2 1896 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 C2CD2LO14523 706 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 P4HA2O15460 535 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 TLR2O60603 784 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 CD48P09326 243 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 IDEP14735 1019 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 VCAM1P19320 739 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 SP100P23497 879 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-201ENST00000359785 GPSM2P81274 684 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 MAP3K10Q02779 954 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 KIF22Q14807 665 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 KARSQ15046 597 aaKnown RBP4.9□□□□□ -1.62
PTPN22-201ENST00000359785 SF3B3Q15393 1217 aaKnown RBP4.9□□□□□ -1.62
PTPN22-201ENST00000359785 TTC19Q6DKK2 380 aaPredicted RBP4.9□□□□□ -1.62
PTPN22-201ENST00000359785 GADL1Q6ZQY3 521 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 ARHGAP22Q7Z5H3 698 aa4.9□□□□□ -1.62
PTPN22-201ENST00000359785 IRF2BP2Q7Z5L9 587 aa4.9□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms