RNA–Protein interactions for RNA: ENST00000359366.9

ATXN3-202, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 2,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-202ENST00000359366 KRT9P35527 623 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 HERVK_113P62684 666 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 CBX1P83916 185 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 NAA30Q147X3 362 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 EPHA7Q15375 998 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ZCWPW2Q504Y3 356 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ODR4Q5SWX8 454 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ICE2Q659A1 982 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 TRAF7Q6Q0C0 670 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PADI6Q6TGC4 694 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SYT10Q6XYQ8 523 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 USP50Q70EL3 339 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 CYFIP1Q7L576 1253 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PRRT2Q7Z6L0 340 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ERO1BQ86YB8 467 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RDH13Q8NBN7 331 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ZSWIM2Q8NEG5 633 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 MYRIPQ8NFW9 859 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 NSUN6Q8TEA1 469 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 MOV10L1Q9BXT6 1211 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SPATC1LQ9H0A9 340 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 MMRN2Q9H8L6 949 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RRAGCQ9HB90 399 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 TUFT1Q9NNX1 390 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 LZTFL1Q9NQ48 299 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 FRMD3A2A2Y4 597 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SOWAHBA6NEL2 793 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PPP1R12AO14974 1030 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ZNF862O60290 1169 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PLEKP08567 350 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 TRIM21P19474 475 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 NR2F2P24468 414 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 YWHABP31946 246 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SPAG1Q07617 926 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ADAM9Q13443 819 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 MOGSQ13724 837 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PTPN14Q15678 1187 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ENOX2Q16206 610 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SH3D19Q5HYK7 790 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 SWSAP1Q6NVH7 229 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 LBX2Q6XYB7 198 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RINLQ6ZS11 566 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 ANKRD23Q86SG2 305 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 NLRX1Q86UT6 975 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RBM46Q8TBY0 533 aaKnown RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 FAM84AQ96KN4 292 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 NACC1Q96RE7 527 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RIT2Q99578 217 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 TSG101Q99816 390 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 LRRC27Q9C0I9 530 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 OGFRQ9NZT2 677 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 RBPJLQ9UBG7 517 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 GABBR1Q9UBS5 961 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 FEZ2Q9UHY8 353 aaPredicted RBP5.6□□□□□ -1.51
ATXN3-202ENST00000359366 PPP2R2CQ9Y2T4 447 aa5.6□□□□□ -1.51
ATXN3-202ENST00000359366 MYH9P35579 1960 aaKnown RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ZMYM2Q9UBW7 1377 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 SPDYE5A6NIY4 337 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 P4HBP07237 508 aaKnown RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ACTN1P12814 892 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 KCNA2P16389 499 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 GUCY2CP25092 1073 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 QARSP47897 775 aaKnown RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 RARRES1P49788 294 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 CYP2J2P51589 502 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 PPATQ06203 517 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 MAPK7Q13164 816 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 PSMD2Q13200 908 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 VWA3BQ502W6 1294 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 XKR9Q5GH70 373 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 DCAF17Q5H9S7 520 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 GJC2Q5T442 439 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 FAM102BQ5T8I3 360 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 NYAP1Q6ZVC0 841 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ANO5Q75V66 913 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 CCDC60Q8IWA6 550 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 REXO1L1PQ8IX06 675 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 LRRN4CLQ8ND94 238 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ZBTB10Q96DT7 871 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 SLC10A4Q96EP9 437 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 CCDC43Q96MW1 224 aaKnown RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 FIZ1Q96SL8 496 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 PORCNQ9H237 461 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 NDST4Q9H3R1 872 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 PCIF1Q9H4Z3 704 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ZSWIM4Q9H7M6 989 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 PARVGQ9HBI0 331 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 NLRC4Q9NPP4 1024 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 ABHD10Q9NUJ1 306 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 TRIM10Q9UDY6 481 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 V9GYY5 206 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-202ENST00000359366 FRMPD4Q14CM0 1322 aa5.59□□□□□ -1.51
ATXN3-202ENST00000359366 K7ENM7 598 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 SLC16A4O15374 487 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 TGFB1I1O43294 461 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 AKAP3O75969 853 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 BCRP11274 1271 aa5.59□□□□□ -1.52
ATXN3-202ENST00000359366 FKBP3Q00688 224 aaKnown RBP5.59□□□□□ -1.52
ATXN3-202ENST00000359366 GHRHRQ02643 423 aa5.59□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms