RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 GLE1Q53GS7 698 aaKnown RBP13.27□□□□□ -0.29
COL20A1-201ENST00000358894 CAPN12Q6ZSI9 719 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 CEP170P1Q96L14 293 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 BLOC1S4Q9NUP1 217 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 NKIRAS1Q9NYS0 192 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 AMACRQ9UHK6 382 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 SUGT1Q9Y2Z0 365 aa13.27□□□□□ -0.29
COL20A1-201ENST00000358894 LRRIQ4A6NIV6 560 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 GAS8O95995 478 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 PTK2Q05397 1052 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 GJB7Q6PEY0 223 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 LXNQ9BS40 222 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 ANKFY1Q9P2R3 1169 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 SNX24Q9Y343 169 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 KRT14P02533 472 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 CARSP49589 748 aaKnown RBP13.26□□□□□ -0.29
COL20A1-201ENST00000358894 EP400NLQ6ZTU2 488 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 FMO2Q99518 471 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 KCPQ6ZWJ8 1503 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 DKC1O60832 514 aaKnown RBP eCLIP13.26□□□□□ -0.29
COL20A1-201ENST00000358894 PPP2R5EQ16537 467 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 DEPTORQ8TB45 409 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 KMT5AQ9NQR1 393 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 FAM114A2Q9NRY5 505 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 PRR12Q9ULL5 1215 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 FAM169AQ9Y6X4 670 aa13.26□□□□□ -0.29
COL20A1-201ENST00000358894 PDXKO00764 312 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 EYA4O95677 639 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 ADCY1Q08828 1119 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 FBXW10Q5XX13 1052 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 FRMD5Q7Z6J6 570 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 TMEM206Q9H813 350 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 DNAJC17Q9NVM6 304 aaKnown RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 TMOD4Q9NZQ9 345 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 SEPT9Q9UHD8 586 aaPredicted RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 AGTPBP1Q9UPW5 1226 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 STK38LQ9Y2H1 464 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 ADCY8P40145 1251 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 MFAP3P55082 362 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 DR1Q01658 176 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 TRPC3Q13507 836 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 UAP1Q16222 522 aaPredicted RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 MUM1L1Q5H9M0 696 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 PAPD7Q5XG87 772 aaKnown RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 TRIM68Q6AZZ1 485 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 HHIPL2Q6UWX4 724 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 SLC51AQ86UW1 340 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 IRF2BP1Q8IU81 584 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 CACNA2D3Q8IZS8 1091 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 ANKS1AQ92625 1134 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 PACSIN1Q9BY11 444 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 NYAP2Q9P242 653 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 NOC2LQ9Y3T9 749 aaKnown RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 SLC16A4O15374 487 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 NPY5RQ15761 445 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 CEP55Q53EZ4 464 aa13.25□□□□□ -0.29
COL20A1-201ENST00000358894 TAB3Q8N5C8 712 aaPredicted RBP13.25□□□□□ -0.29
COL20A1-201ENST00000358894 MYO1FO00160 1098 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 SLC27A3Q5K4L6 730 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 RAVER2Q9HCJ3 691 aaKnown RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 DDTLA6NHG4 134 aaPredicted RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 EPHB6O15197 1021 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 KRT19P08727 400 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 RPA1P27694 616 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 TNFAIP1Q13829 316 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 TRIP13Q15645 432 aaPredicted RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 KAZNQ674X7 775 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 WDR59Q6PJI9 974 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 DDX42Q86XP3 938 aaKnown RBP eCLIP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 GINS2Q9Y248 185 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 CCDC188H7C350 402 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 SART1O43290 800 aaKnown RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 DAPK3O43293 454 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 FGRP09769 529 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 PBX1P40424 430 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 NSFP46459 744 aaKnown RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 CASP4P49662 377 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 PSMC6P62333 389 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 EDRF1Q3B7T1 1238 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 FIGNQ5HY92 759 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 GKAP1Q5VSY0 366 aaPredicted RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 TAOK1Q7L7X3 1001 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 TCP11Q8WWU5 503 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 MTMR8Q96EF0 704 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 PARP2Q9UGN5 583 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 ARFGEF2Q9Y6D5 1785 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 RCCD1A6NED2 376 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 CCDC160A6NGH7 325 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 IL1R1P14778 569 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 POLGP54098 1239 aaPredicted RBP13.24□□□□□ -0.29
COL20A1-201ENST00000358894 RHBDL3P58872 404 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 CLUL1Q15846 466 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 WDR93Q6P2C0 686 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 FAM160B2Q86V87 743 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 C4orf32Q8N8J7 132 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 HDAC7Q8WUI4 952 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 SCFD1Q8WVM8 642 aa13.24□□□□□ -0.29
COL20A1-201ENST00000358894 TRIM6Q9C030 488 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms