RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 EDEM3Q9BZQ6 932 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 NEUROG2Q9H2A3 272 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 MTMR4Q9NYA4 1195 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 USTQ9Y2C2 406 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 CTDP1Q9Y5B0 961 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 AKAP11Q9UKA4 1901 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TNS2Q63HR2 1409 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ANKRD62A6NC57 917 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 RASGRF2O14827 1237 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 PJA2O43164 708 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 STX2P32856 288 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 SP4Q02446 784 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ITGB3BPQ13352 177 aaPredicted RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 PDIA5Q14554 519 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 QRICH1Q2TAL8 776 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 PPP4R3AQ6IN85 833 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 STXBP4Q6ZWJ1 553 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 TRIM59Q8IWR1 403 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 SUGP1Q8IWZ8 645 aaKnown RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 KIF2BQ8N4N8 673 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 KCNV2Q8TDN2 545 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 VCPKMTQ9H867 229 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 JMJD4Q9H9V9 463 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 METTL14Q9HCE5 456 aaKnown RBP7.12□□□□□ -1.27
CSDE1-203ENST00000358528 PLCB1Q9NQ66 1216 aa7.12□□□□□ -1.27
CSDE1-203ENST00000358528 ARHGEF35A5YM69 484 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 AKAP3O75969 853 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 NOL4O94818 638 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PON1P27169 355 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 MYL7Q01449 175 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ITIH3Q06033 890 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SLC29A2Q14542 456 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ZNF662Q6ZS27 426 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 VSIG1Q86XK7 387 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 KLHL29Q96CT2 875 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LEMD3Q9Y2U8 911 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 GOLGA8IPA6NC78 632 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 GOLGA8JA6NMD2 632 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ZBTB5O15062 677 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SKAP2O75563 359 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LMNB1P20700 586 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 HNRNPH3P31942 346 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PSMC2P35998 433 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 HSPA9P38646 679 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ARHGAP4P98171 946 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PPP2R5AQ15172 486 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 HP1BP3Q5SSJ5 553 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 CYP4F22Q6NT55 531 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FAM47EQ6ZV65 393 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 TAOK1Q7L7X3 1001 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 RPAINQ86UA6 219 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 CNPY4Q8N129 248 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FBXO25Q8TCJ0 367 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ELMO3Q96BJ8 720 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 XPO6Q96QU8 1125 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 BCAS3Q9H6U6 928 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 TRIM37O94972 964 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SHBGP04278 402 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SCP2P22307 547 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 CDC25CP30307 473 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SCTRP47872 440 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 GPSM2P81274 684 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PLCB3Q01970 1234 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LONRF1Q17RB8 773 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 C16orf86Q6ZW13 317 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FBXO11Q86XK2 927 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SLFN12Q8IYM2 578 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LRRC34Q8IZ02 419 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 EPS8L3Q8TE67 593 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 RUBCNQ92622 972 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FAM118BQ9BPY3 351 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 STMN4Q9H169 189 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 NKIRAS1Q9NYS0 192 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 CNOT8Q9UFF9 292 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 SUFUQ9UMX1 484 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.11□□□□□ -1.273e-6■■■■□ 21.1
CSDE1-203ENST00000358528 COL1A1P02452 1464 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 K7ENM7 598 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 GAS7O60861 476 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FTLP02792 175 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 FGRP09769 529 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 ELF1P32519 619 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 GCLMP48507 274 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 IFI35P80217 286 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LACTBP83111 547 aaPredicted RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 C10orf76Q5T2E6 689 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 INTS8Q75QN2 995 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 CATSPER3Q86XQ3 398 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PRPF38AQ8NAV1 312 aaKnown RBP7.11□□□□□ -1.27
CSDE1-203ENST00000358528 C1orf54Q8WWF1 131 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 DNAJC19Q96DA6 116 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 C18orf8Q96DM3 657 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 BTBD6Q96KE9 485 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 MTMR9Q96QG7 549 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 THAP2Q9H0W7 228 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 PPP1R9AQ9ULJ8 1098 aa7.11□□□□□ -1.27
CSDE1-203ENST00000358528 LMTK3Q96Q04 1460 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 THAP12O43422 761 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 BCRP11274 1271 aa7.1□□□□□ -1.27
CSDE1-203ENST00000358528 GCFC2P16383 781 aaKnown RBP7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms