RNA–Protein interactions for RNA: ENST00000357890.9

RNF40-202, Transcript of ring finger protein 40, humanhuman

TSL 2 BASIC

Gene RNF40, Length 3,917 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-202ENST00000357890 PFDN1O60925 122 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 ELF3P78545 371 aaPredicted RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 MKRN4PQ13434 485 aaPredicted RBP10.81□□□□□ -0.68
RNF40-202ENST00000357890 BIRC3Q13489 604 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 PDXDC1Q6P996 788 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 RAD54LQ92698 747 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 FMO2Q99518 471 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 GLT8D2Q9H1C3 349 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 FLT1P17948 1338 aa10.81□□□□□ -0.68
RNF40-202ENST00000357890 CCDC169A6NNP5 214 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 GCNT3O95395 438 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 GNA14O95837 355 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 SMARCA1P28370 1054 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 SLC8A3P57103 927 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 GPSM2P81274 684 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 COASYQ13057 564 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 EXOC3L4Q17RC7 722 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 USH1GQ495M9 461 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 PRR16Q569H4 304 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 SYCP3Q8IZU3 236 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 AGAP11Q8TF27 550 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 MTMR8Q96EF0 704 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 XPO6Q96QU8 1125 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 OSBPL7Q9BZF2 842 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 PAPOLBQ9NRJ5 636 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 DNM3Q9UQ16 869 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 SNX24Q9Y343 169 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 KDM3AQ9Y4C1 1321 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 GPR75-ASB3A0A0A6YYF3 556 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 CHMP2AO43633 222 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 TTLL1O95922 423 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 EPB41P11171 864 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 KLRC1P26715 233 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 HOXA7P31268 230 aaPredicted RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 FNTAP49354 379 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 TAOK1Q7L7X3 1001 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 TRPM8Q7Z2W7 1104 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 LRRC34Q8IZ02 419 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 TEKT4Q8WW24 435 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 HOMER3Q9NSC5 361 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 RNF14Q9UBS8 474 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 TCEAL9Q9UHQ7 104 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 PTPN22Q9Y2R2 807 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 A0A1W2PQJ5 194 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 RASSF10A6NK89 507 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 PGRMC1O00264 195 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 BBOX1O75936 387 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 RPL13P26373 211 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 CNGA1P29973 690 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 MSH2P43246 934 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 CENPPQ6IPU0 288 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 BZW1Q7L1Q6 419 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 ZC3H18Q86VM9 953 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 DNAAF5Q86Y56 855 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 RDH13Q8NBN7 331 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 CELF4Q9BZC1 486 aaKnown RBP10.8□□□□□ -0.68
RNF40-202ENST00000357890 FAM114A2Q9NRY5 505 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 USP40Q9NVE5 1235 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 DLGAP2Q9P1A6 1054 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 CEP72Q9P209 647 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 SERPINB13Q9UIV8 391 aa10.8□□□□□ -0.68
RNF40-202ENST00000357890 ABCA3Q99758 1704 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 PNMA6FA0A0J9YX94 578 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 ESYT2A0FGR8 921 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 PLA2G4BP0C869 781 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CALCOCO2Q13137 446 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 LAMB3Q13751 1172 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 PDIA5Q14554 519 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 FIGNQ5HY92 759 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 GPATCH4Q5T3I0 446 aaKnown RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 ALKBH5Q6P6C2 394 aaKnown RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 RTFDC1Q9BY42 306 aaPredicted RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 ATP6V0A2Q9Y487 856 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L15C9J2P7 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L13C9JLJ4 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L11C9JVI0 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L18D6R9N7 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L22D6RA61 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L17D6RBQ6 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L19D6RCP7 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L20D6RJB6 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 ZNF263O14978 683 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 C21orf2O43822 256 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 SLC37A4O43826 429 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 H2AFZP0C0S5 128 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L24Q0WX57 530 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 MIIPQ5JXC2 388 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 TMEM154Q6P9G4 183 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 USP17L6PQ6QN14 398 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 H2AFVQ71UI9 128 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 GLIS3Q8NEA6 775 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 ABTB1Q969K4 478 aaPredicted RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 FAXDC2Q96IV6 333 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 PLCB1Q9NQ66 1216 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 A1CFQ9NQ94 594 aaKnown RBP10.79□□□□□ -0.68
RNF40-202ENST00000357890 PCDHA1Q9Y5I3 950 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 NPHP3-ACAD11A0A0J9YXS1 232 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 POTEB3A0JP26 581 aa10.79□□□□□ -0.68
RNF40-202ENST00000357890 CCDC189A1A4V9 331 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms