RNA–Protein interactions for RNA: ENST00000357409.9

VPS13A-202, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13A, Length 9,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-202ENST00000357409 ARHGEF18Q6ZSZ5 1173 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 LRRC8AQ8IWT6 810 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 RNF149Q8NC42 400 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 GABPB2Q8TAK5 448 aaPredicted RBP7.9□□□□□ -1.14
VPS13A-202ENST00000357409 PPP2R2CQ9Y2T4 447 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 ATP10BO94823 1461 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 HUS1O60921 280 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 COG7P83436 770 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 NFIXQ14938 502 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 MAPK6Q16659 721 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 PRAMEF19Q5SWL8 479 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 TMTC1Q8IUR5 882 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 RTKN2Q8IZC4 609 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 SNX21Q969T3 373 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 ANAPC7Q9UJX3 599 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 TFR2Q9UP52 801 aa7.9□□□□□ -1.14
VPS13A-202ENST00000357409 EHBP1L1Q8N3D4 1523 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 WEE2P0C1S8 567 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 NNMTP40261 264 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 RINLQ6ZS11 566 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 PID1Q7Z2X4 250 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 DHX35Q9H5Z1 703 aaKnown RBP7.9□□□□□ -1.15
VPS13A-202ENST00000357409 N6AMT1Q9Y5N5 214 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 CYP27B1O15528 508 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 ATP5DP30049 168 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 GPC3P51654 580 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 DAB2P98082 770 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 ARHGEF25Q86VW2 580 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 GOLGA5Q8TBA6 731 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 CERKQ8TCT0 537 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 HOXC10Q9NYD6 342 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 GARSP41250 739 aaKnown RBP7.9□□□□□ -1.15
VPS13A-202ENST00000357409 CCDC138Q96M89 665 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 PARVGQ9HBI0 331 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF302Q9NR11 478 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 GCNT4Q9P109 453 aa7.9□□□□□ -1.15
VPS13A-202ENST00000357409 M0QYV0 167 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PRRG1O14668 218 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SEC24DO94855 1032 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CCT5P48643 541 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PSMC1P62191 440 aaKnown RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ZC3H12BQ5HYM0 836 aaKnown RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CACTINQ8WUQ7 758 aaKnown RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 TCP11Q8WWU5 503 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SNX24Q9Y343 169 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PGK2P07205 417 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ARHGDIAP52565 204 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PHEXP78562 749 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 GFPT1Q06210 699 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 TMEM47Q9BQJ4 181 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PI4K2AQ9BTU6 479 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 TMEM39BQ9GZU3 492 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PALLDQ8WX93 1383 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF233A6NK53 670 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SGO1Q5FBB7 561 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SLC44A2Q8IWA5 706 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 FSD1LQ9BXM9 530 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 E5RI56 91 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 H3BRJ5 948 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 DPEP1P16444 411 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PPP3CCP48454 512 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CC2D1AQ6P1N0 951 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 TRIM59Q8IWR1 403 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CACNA2D3Q8IZS8 1091 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ARFGAP2Q8N6H7 521 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 OR6P1Q8NGX9 317 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ZSWIM6Q9HCJ5 1215 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 V9GYQ6 96 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 VTNP04004 478 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 GNASQ5JWF2 1037 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 MAP1SQ66K74 1059 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ARHGAP30Q7Z6I6 1101 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SFR1Q86XK3 245 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 EMID1Q96A84 441 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 VCX3BQ9H321 246 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SNX9Q9Y5X1 595 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ZNF274Q96GC6 653 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PGLYRP2Q96PD5 576 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 NUDCD1Q96RS6 583 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ATP1A3P13637 1013 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 GJB7Q6PEY0 223 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 SYCE1Q8N0S2 351 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 IPCEF1Q8WWN9 437 aaPredicted RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 P2RX5Q93086 422 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 NEDD4P46934 1319 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 MCF2LO15068 1137 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 NPTXRO95502 500 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 GUCY1A2P33402 732 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CLNS1AP54105 237 aaKnown RBP7.89□□□□□ -1.15
VPS13A-202ENST00000357409 DGKZQ13574 1117 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 GAS2L3Q86XJ1 694 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 ARL8AQ96BM9 186 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PRIMPOLQ96LW4 560 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 PNMA2Q9UL42 364 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 AGAP1Q9UPQ3 857 aa7.89□□□□□ -1.15
VPS13A-202ENST00000357409 CDC27P30260 824 aa7.88□□□□□ -1.15
VPS13A-202ENST00000357409 URGCPQ8TCY9 931 aa7.88□□□□□ -1.15
VPS13A-202ENST00000357409 CPA5Q8WXQ8 436 aa7.88□□□□□ -1.15
VPS13A-202ENST00000357409 MAML1Q92585 1016 aa7.88□□□□□ -1.15
VPS13A-202ENST00000357409 CPB2Q96IY4 423 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms