RNA–Protein interactions for RNA: ENST00000357207.8

TRAPPC11-202, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 4,435 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-202ENST00000357207 GINM1Q9NU53 330 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 MINPP1Q9UNW1 487 aa16.76■□□□□ 0.27
TRAPPC11-202ENST00000357207 PXDNLA1KZ92 1463 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 MAML1Q92585 1016 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 PI4KBQ9UBF8 816 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 CROCC2H7BZ55 1655 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 GCLMP48507 274 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 STAT2P52630 851 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 TNFAIP1Q13829 316 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 ELOA2Q8IYF1 753 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 CALR3Q96L12 384 aaKnown RBP16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 FGFR1OP2Q9NVK5 253 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 TOM1L1O75674 476 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 ECM2O94769 699 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 FTLP02792 175 aaPredicted RBP16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 LSP1P33241 339 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 CORO7P57737 925 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 STK4Q13043 487 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 LRRC14Q15048 493 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 CLEC4GQ6UXB4 293 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 TMC4Q7Z404 712 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 XXYLT1Q8NBI6 393 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 HPS3Q969F9 1004 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 ADAM22Q9P0K1 906 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 SCINQ9Y6U3 715 aa16.75■□□□□ 0.27
TRAPPC11-202ENST00000357207 TDP2O95551 362 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 CCDC137Q6PK04 289 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 FAM20AQ96MK3 541 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 L1RE1Q9UN81 338 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 IVNS1ABPQ9Y6Y0 642 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 DHX34Q14147 1143 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 RBM12Q9NTZ6 932 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 TJP3O95049 919 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 GSTA1P08263 222 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 GSTA2P09210 222 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 TAF12Q16514 161 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 ATG16L1Q676U5 607 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 TTC17Q96AE7 1141 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 CEP95Q96GE4 821 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 RNPC3Q96LT9 517 aaKnown RBP16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 PNKPQ96T60 521 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 TMEM60Q9H2L4 133 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 SLC24A3Q9HC58 644 aa16.74■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZNF233A6NK53 670 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 KRT37O76014 449 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 SETSIPP0DME0 302 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 GRIN1Q05586 938 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 TRIM59Q8IWR1 403 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PPARGC1AQ9UBK2 798 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PCDHA6Q9UN73 950 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 HPS5Q9UPZ3 1129 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PCDHA8Q9Y5H6 950 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZCCHC11Q5TAX3 1644 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 A0A0G2JLW4 131 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 DCAF8L1A6NGE4 600 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PPFIA2O75334 1257 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 ACTN1P12814 892 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PEX3P56589 373 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PRKG1Q13976 671 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 CC2D2BQ6DHV5 1058 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZC3H18Q86VM9 953 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 TGS1Q96RS0 853 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 CYTH2Q99418 400 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 YIPF3Q9GZM5 350 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 EPS15L1Q9UBC2 864 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 LMTK3Q96Q04 1460 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 ECE1P42892 770 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PCGF5Q86SE9 256 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 NIM1KQ8IY84 436 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 KCTD6Q8NC69 237 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 PPWD1Q96BP3 646 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 ADGRB3O60242 1522 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 POTEFA5A3E0 1075 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 POTEIP0CG38 1075 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 CARSP49589 748 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 TFAMQ00059 246 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 POTEGQ6S5H5 508 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 POTEEQ6S8J3 1075 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 MMGT1Q8N4V1 131 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 KCNV2Q8TDN2 545 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 FAM167BQ9BTA0 163 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 SENP2Q9HC62 589 aa16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 NXF1Q9UBU9 619 aaKnown RBP16.73■□□□□ 0.27
TRAPPC11-202ENST00000357207 GOLGA8QA0A0J9YX86 632 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 GOLGA8OA6NCC3 632 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 GOLGA8NF8WBI6 632 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ARL4CP56559 192 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZNF746Q6NUN9 644 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 GIMAP8Q8ND71 665 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZNF564Q8TBZ8 553 aaPredicted RBP16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZIM3Q96PE6 472 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 AS3MTQ9HBK9 375 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ARHGEF40Q8TER5 1519 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 SALL3Q9BXA9 1300 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 SH3BP5O60239 455 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 CD58P19256 250 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 PTPAQ15257 358 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 GRAMD1BQ3KR37 738 aa16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 RBM41Q96IZ5 413 aaKnown RBP16.72■□□□□ 0.27
TRAPPC11-202ENST00000357207 ZFP69BQ9UJL9 534 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms