RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 PNMA5Q96PV4 448 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 CTAGE1Q96RT6 745 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 ATP6V0A4Q9HBG4 840 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 PDLIM7Q9NR12 457 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 TMEM39AQ9NV64 488 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 USP25Q9UHP3 1055 aa17.81■□□□□ 0.44
FDPS-201ENST00000356657 STAT6P42226 847 aa17.8■□□□□ 0.44
FDPS-201ENST00000356657 ZRSR1Q15695 479 aaKnown RBP17.8■□□□□ 0.44
FDPS-201ENST00000356657 ECM1Q16610 540 aa17.8■□□□□ 0.44
FDPS-201ENST00000356657 TRMT1LQ7Z2T5 733 aaKnown RBP17.8■□□□□ 0.44
FDPS-201ENST00000356657 LINC01465Q8N7H1 131 aa17.8■□□□□ 0.44
FDPS-201ENST00000356657 LARP4BQ92615 738 aaKnown RBP17.8■□□□□ 0.44
FDPS-201ENST00000356657 LRRC27Q9C0I9 530 aa17.8■□□□□ 0.44
FDPS-201ENST00000356657 BHMT2Q9H2M3 363 aa17.8■□□□□ 0.44
FDPS-201ENST00000356657 M0QZ92 97 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 NPEPPSP55786 919 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 HIC1Q14526 733 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 EMC2Q15006 297 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 SPECC1Q5M775 1068 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 USP49Q70CQ1 688 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 SYT2Q8N9I0 419 aaPredicted RBP17.79■□□□□ 0.44
FDPS-201ENST00000356657 TRAPPC12Q8WVT3 735 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 MRPS27Q92552 414 aaKnown RBP17.79■□□□□ 0.44
FDPS-201ENST00000356657 CCDC34Q96HJ3 373 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 MTRQ99707 1265 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 NOC4LQ9BVI4 516 aaKnown RBP17.79■□□□□ 0.44
FDPS-201ENST00000356657 HIPK3Q9H422 1215 aa17.79■□□□□ 0.44
FDPS-201ENST00000356657 GOLGA6L22H0YM25 854 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 ZNF200P98182 395 aaPredicted RBP17.78■□□□□ 0.44
FDPS-201ENST00000356657 IER5Q5VY09 327 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 EFCAB12Q6NXP0 572 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 PADI6Q6TGC4 694 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 METTL13Q8N6R0 699 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 RAD54LQ92698 747 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 CHAMP1Q96JM3 812 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 GDPD2Q9HCC8 539 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 KCNG1Q9UIX4 513 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 KCNH3Q9ULD8 1083 aa17.78■□□□□ 0.44
FDPS-201ENST00000356657 MYH11P35749 1972 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 TMEM150BA6NC51 233 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 E9PMD0 336 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 ZBTB39O15060 712 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 ASAP2O43150 1006 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 PLA2G4BP0C869 781 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 CYP11B2P19099 503 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 RFC2P35250 354 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 MXD4Q14582 209 aaPredicted RBP17.77■□□□□ 0.44
FDPS-201ENST00000356657 TRIM71Q2Q1W2 868 aaKnown RBP17.77■□□□□ 0.44
FDPS-201ENST00000356657 PSPC1Q8WXF1 523 aaKnown RBP17.77■□□□□ 0.44
FDPS-201ENST00000356657 TNMDQ9H2S6 317 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 ZMYND8Q9ULU4 1186 aaPredicted RBP17.77■□□□□ 0.44
FDPS-201ENST00000356657 HPSEQ9Y251 543 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 SQORQ9Y6N5 450 aa17.77■□□□□ 0.44
FDPS-201ENST00000356657 LTBP2Q14767 1821 aa17.77■□□□□ 0.43
FDPS-201ENST00000356657 USO1O60763 962 aaKnown RBP17.76■□□□□ 0.43
FDPS-201ENST00000356657 TIMP1P01033 207 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 CKBP12277 381 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 RAG1P15918 1043 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 SELPP16109 830 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 SYN1P17600 705 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 GUCY2CP25092 1073 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 SLC12A3P55017 1021 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 AMPD3Q01432 767 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 E2F4Q16254 413 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 FAM26DQ5JW98 314 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 KCNK18Q7Z418 384 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 KIAA0319LQ8IZA0 1049 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 DHX38Q92620 1227 aaKnown RBP17.76■□□□□ 0.43
FDPS-201ENST00000356657 KIFAP3Q92845 792 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 SUGCTQ9HAC7 445 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 C17orf75Q9HAS0 396 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 PRDM5Q9NQX1 630 aaPredicted RBP17.76■□□□□ 0.43
FDPS-201ENST00000356657 BLOC1S4Q9NUP1 217 aa17.76■□□□□ 0.43
FDPS-201ENST00000356657 PFKFB1P16118 471 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 THPOP40225 353 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 UBE2HP62256 183 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 MRPS6P82932 125 aaKnown RBP17.75■□□□□ 0.43
FDPS-201ENST00000356657 POU5F1BQ06416 359 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 NAALADL2Q58DX5 795 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 RINT1Q6NUQ1 792 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 RUFY4Q6ZNE9 571 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 SV2BQ7L1I2 683 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 ZNF410Q86VK4 478 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 USP38Q8NB14 1042 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 PPP1R13LQ8WUF5 828 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 DNAJB3Q8WWF6 145 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 DRC1Q96MC2 740 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 FAM49AQ9H0Q0 323 aaPredicted RBP17.75■□□□□ 0.43
FDPS-201ENST00000356657 BMP2KQ9NSY1 1161 aaPredicted RBP17.75■□□□□ 0.43
FDPS-201ENST00000356657 ODF2LQ9ULJ1 636 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 AKT3Q9Y243 479 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 POLR2DO15514 142 aaKnown RBP17.75■□□□□ 0.43
FDPS-201ENST00000356657 MYL1P05976 194 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 PFKMP08237 780 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 SCP2P22307 547 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 SYKP43405 635 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 CLCN3P51790 818 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 PPP2R5AQ15172 486 aa17.75■□□□□ 0.43
FDPS-201ENST00000356657 PCBP1Q15365 356 aaKnown RBP eCLIP17.75■□□□□ 0.434e-7■□□□□ 9.7
FDPS-201ENST00000356657 MFSD5Q6N075 450 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms