RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PCDHB12Q9Y5F1 795 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 MRPL42Q9Y6G3 142 aaKnown RBP12.05□□□□□ -0.48
CAPN3-204ENST00000356316 NID2Q14112 1375 aa12.05□□□□□ -0.48
CAPN3-204ENST00000356316 CSPG5O95196 566 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 MMP1P03956 469 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 NEFLP07196 543 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ALADP13716 330 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ZSCAN20P17040 1043 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ATP4AP20648 1035 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 SFNP31947 248 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 EVCP57679 992 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 KIZQ2M2Z5 673 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 EFCAB12Q6NXP0 572 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 KLHL23Q8NBE8 558 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 MICAL1Q8TDZ2 1067 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 LINC01599Q8WXQ3 324 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ZNF274Q96GC6 653 aaPredicted RBP12.04□□□□□ -0.48
CAPN3-204ENST00000356316 PPP1R16BQ96T49 567 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 RIT2Q99578 217 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 TEKT3Q9BXF9 490 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 TMX1Q9H3N1 280 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ATP6V0A4Q9HBG4 840 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ERVK-5Q9HDB9 667 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 PCDHA4Q9UN74 947 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 AKT3Q9Y243 479 aa12.04□□□□□ -0.48
CAPN3-204ENST00000356316 ZBTB42B2RXF5 422 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 PI4K2BG5E9Z4 385 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 ADAMTS3O15072 1205 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 MSH4O15457 936 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 CHMP2AO43633 222 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 DEXIO95424 95 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 C22orf31O95567 290 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 VTNP04004 478 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 JAK3P52333 1124 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 LRCH2Q5VUJ6 765 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 CRIPAKQ8N1N5 446 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 SCLT1Q96NL6 688 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 OSMRQ99650 979 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 PRKAG3Q9UGI9 489 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 HCN4Q9Y3Q4 1203 aa12.03□□□□□ -0.48
CAPN3-204ENST00000356316 NCOR1O75376 2440 aa12.02□□□□□ -0.48
CAPN3-204ENST00000356316 C5orf42Q9H799 3197 aa12.02□□□□□ -0.48
CAPN3-204ENST00000356316 TBKBP1A7MCY6 615 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 OATP04181 439 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 ITGB1P05556 798 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 LINC00271P0C7V0 271 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 NLRP11P59045 1033 aaKnown RBP12.02□□□□□ -0.49
CAPN3-204ENST00000356316 CDC42EP1Q00587 391 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 HYAL1Q12794 435 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 STK3Q13188 491 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 COL19A1Q14993 1142 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 CSPP1Q1MSJ5 1256 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 GALNT17Q6IS24 598 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 ABI1Q8IZP0 508 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 BLIDQ8IZY5 108 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 SPPL3Q8TCT6 385 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 POF1BQ8WVV4 589 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 TMEM40Q8WWA1 233 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 SLC5A5Q92911 643 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 POP1Q99575 1024 aaKnown RBP12.02□□□□□ -0.49
CAPN3-204ENST00000356316 LRFN3Q9BTN0 628 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 UPF3BQ9BZI7 483 aaKnown RBP12.02□□□□□ -0.49
CAPN3-204ENST00000356316 TM6SF1Q9BZW5 370 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 CD320Q9NPF0 282 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 PDRG1Q9NUG6 133 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 TMEM161AQ9NX61 479 aa12.02□□□□□ -0.49
CAPN3-204ENST00000356316 WDR81Q562E7 1941 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 C9IYK1 514 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 HOXA2O43364 376 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 MGEA5O60502 916 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 GPR37L1O60883 481 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 GPR32O75388 356 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 CDKL5O76039 1030 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 XBP1P17861 261 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 EIF4BP23588 611 aaKnown RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 NDUFV1P49821 464 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 GATMP50440 423 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 DNM2P50570 870 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 CLCN3P51790 818 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 FAM189BP81408 668 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 UBE3AQ05086 875 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 TBC1D8BQ0IIM8 1120 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 TOB2Q14106 344 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 CLUL1Q15846 466 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 CTC1Q2NKJ3 1217 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 Q4G0T1 1027 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 FAM102BQ5T8I3 360 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 MIER3Q7Z3K6 550 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 FAM228AQ86W67 206 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 THNSL1Q8IYQ7 743 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 FAM177A1Q8N128 213 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 RDM1Q8NG50 284 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 LENG9Q96B70 501 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 FAM122AQ96E09 287 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 PHF12Q96QT6 1004 aa12.01□□□□□ -0.49
CAPN3-204ENST00000356316 LARP6Q9BRS8 491 aaKnown RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 SLKQ9H2G2 1235 aaPredicted RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 ELAC1Q9H777 363 aaKnown RBP12.01□□□□□ -0.49
CAPN3-204ENST00000356316 TLE6Q9H808 572 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms