RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 MTERF2Q49AM1 385 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ANO5Q75V66 913 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 EPM2AIP1Q7L775 607 aaPredicted RBP19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ZNF720Q7Z2F6 126 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 CCDC60Q8IWA6 550 aaPredicted RBP19.35■□□□□ 0.69
NPAS3-202ENST00000356141 MNS1Q8NEH6 495 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 OPTNQ96CV9 577 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 ZBTB10Q96DT7 871 aa19.35■□□□□ 0.69
NPAS3-202ENST00000356141 NAA15Q9BXJ9 866 aaKnown RBP19.35■□□□□ 0.69
NPAS3-202ENST00000356141 SPDYE4A6NLX3 237 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 AKR1B10O60218 316 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 NOL4O94818 638 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 MARK3P27448 753 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 COBLL1Q53SF7 1204 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 TEX35Q5T0J7 233 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 MTERF4Q7Z6M4 381 aaKnown RBP19.34■□□□□ 0.69
NPAS3-202ENST00000356141 CEP170P1Q96L14 293 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 CBWD1Q9BRT8 395 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 MLXIPQ9HAP2 919 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 XRCC5P13010 732 aaKnown RBP19.34■□□□□ 0.69
NPAS3-202ENST00000356141 KCNJ6P48051 423 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 TERF1P54274 439 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 DLG4P78352 724 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 CAPZA3Q96KX2 299 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 FRMPD4Q14CM0 1322 aa19.34■□□□□ 0.69
NPAS3-202ENST00000356141 CALUO43852 315 aaPredicted RBP19.33■□□□□ 0.69
NPAS3-202ENST00000356141 CBX1P83916 185 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 SAAL1Q96ER3 474 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 CCDC51Q96ER9 411 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 BUB1O43683 1085 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 EXOC3O60645 756 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 ASCC2Q9H1I8 757 aaPredicted RBP19.33■□□□□ 0.69
NPAS3-202ENST00000356141 KCND1Q9NSA2 647 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 TYW1Q9NV66 732 aaKnown RBP19.33■□□□□ 0.69
NPAS3-202ENST00000356141 FHOD1Q9Y613 1164 aa19.33■□□□□ 0.69
NPAS3-202ENST00000356141 IREB2P48200 963 aaKnown RBP19.33■□□□□ 0.68
NPAS3-202ENST00000356141 NAP1L1P55209 391 aaKnown RBP19.33■□□□□ 0.68
NPAS3-202ENST00000356141 FAM186BQ8IYM0 893 aa19.33■□□□□ 0.68
NPAS3-202ENST00000356141 SBF1O95248 1867 aa19.33■□□□□ 0.68
NPAS3-202ENST00000356141 WDR64B1ANS9 1081 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 GTF2F1P35269 517 aaKnown RBP eCLIP19.32■□□□□ 0.68
NPAS3-202ENST00000356141 LY6KQ17RY6 165 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 PPP1R13LQ8WUF5 828 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 BSNDQ8WZ55 320 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 BAP1Q92560 729 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 JAKMIP2Q96AA8 810 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 CCDC94Q9BW85 323 aaPredicted RBP19.32■□□□□ 0.68
NPAS3-202ENST00000356141 PHIPQ8WWQ0 1821 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 TLR2O60603 784 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 KIF20AO95235 890 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 EPB41P11171 864 aaKnown RBP19.32■□□□□ 0.68
NPAS3-202ENST00000356141 TRIM50Q86XT4 487 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 JPH1Q9HDC5 661 aaPredicted RBP19.32■□□□□ 0.68
NPAS3-202ENST00000356141 AGPAT3Q9NRZ7 376 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 TBC1D22BQ9NU19 505 aa19.32■□□□□ 0.68
NPAS3-202ENST00000356141 CTIFO43310 598 aaKnown RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 KCNA2P16389 499 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 KIF11P52732 1056 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 GJC2Q5T442 439 aaPredicted RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 TMEM143Q96AN5 459 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 GCNT4Q9P109 453 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 KIF2AO00139 706 aaPredicted RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 IPO7O95373 1038 aaKnown RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 CHMP4BP1P59074 171 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 ACTR2P61160 394 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 MRPS25P82663 173 aaKnown RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 CBWD6Q4V339 395 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 CBWD3Q5JTY5 395 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 CBWD5Q5RIA9 395 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 CCDC127Q96BQ5 260 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 POP1Q99575 1024 aaKnown RBP19.31■□□□□ 0.68
NPAS3-202ENST00000356141 NUP58Q9BVL2 599 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 GBP3Q9H0R5 595 aa19.31■□□□□ 0.68
NPAS3-202ENST00000356141 PHLPP2Q6ZVD8 1323 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 PDXKO00764 312 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 AFPP02771 609 aaKnown RBP19.3■□□□□ 0.68
NPAS3-202ENST00000356141 BCRP11274 1271 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 CEP63Q96MT8 703 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 MOV10L1Q9BXT6 1211 aaKnown RBP19.3■□□□□ 0.68
NPAS3-202ENST00000356141 SPATC1LQ9H0A9 340 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 TRAF3IP3Q9Y228 551 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 PCDHA10Q9Y5I2 948 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 MYH11P35749 1972 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 CLSTN1O94985 981 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 MOCS3O95396 460 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 PSMC5P62195 406 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 ARHGAP44Q17R89 818 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 PDCL2Q8N4E4 241 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 C12orf42Q96LP6 360 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 SPAG5Q96R06 1193 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 SLC9A2Q9UBY0 812 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 ADAMTS1Q9UHI8 967 aa19.3■□□□□ 0.68
NPAS3-202ENST00000356141 TMCO5BA8MYB1 307 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 POTEB2H3BUK9 544 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 GJA5P36382 358 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 PPP2R3AQ06190 1150 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 EXOC3L4Q17RC7 722 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 PDXDC1Q6P996 788 aa19.29■□□□□ 0.68
NPAS3-202ENST00000356141 HAUS6Q7Z4H7 955 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms