RNA–Protein interactions for RNA: ENST00000356000.7

RTN3-205, Transcript of reticulon 3, humanhuman

TSL 2 BASIC

Gene RTN3, Length 2,645 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-205ENST00000356000 UTP6Q9NYH9 597 aaKnown RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 FOXP2O15409 715 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 ENTPD5O75356 428 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 ETS2P15036 469 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 MLH1P40692 756 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 PMS1P54277 932 aaKnown RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 EIF4A1P60842 406 aaKnown RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 ASTE1Q2TB18 679 aaPredicted RBP17.01■□□□□ 0.31
RTN3-205ENST00000356000 DHRS1Q96LJ7 313 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 OLFM3Q96PB7 478 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 COPRSQ9NQ92 184 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 ATP8A1Q9Y2Q0 1164 aa17.01■□□□□ 0.31
RTN3-205ENST00000356000 RNF113AO15541 343 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 ACVR2BQ13705 512 aa17■□□□□ 0.31
RTN3-205ENST00000356000 NRG4Q8WWG1 115 aa17■□□□□ 0.31
RTN3-205ENST00000356000 WASF1Q92558 559 aa17■□□□□ 0.31
RTN3-205ENST00000356000 FAM217BQ9NTX9 383 aaPredicted RBP17■□□□□ 0.31
RTN3-205ENST00000356000 KLHL14Q9P2G3 628 aa17■□□□□ 0.31
RTN3-205ENST00000356000 USH1CQ9Y6N9 552 aa17■□□□□ 0.31
RTN3-205ENST00000356000 IGSF1Q8N6C5 1336 aa17■□□□□ 0.31
RTN3-205ENST00000356000 GPSM2P81274 684 aa17■□□□□ 0.31
RTN3-205ENST00000356000 GSTM4Q03013 218 aa17■□□□□ 0.31
RTN3-205ENST00000356000 SSRP1Q08945 709 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 NAT14Q8WUY8 206 aa17■□□□□ 0.31
RTN3-205ENST00000356000 DHX36Q9H2U1 1008 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 DDX43Q9NXZ2 648 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 IL1RAPL1Q9NZN1 696 aa17■□□□□ 0.31
RTN3-205ENST00000356000 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 TMED5Q9Y3A6 229 aa17■□□□□ 0.31
RTN3-205ENST00000356000 TMEM247A6NEH6 219 aa17■□□□□ 0.31
RTN3-205ENST00000356000 SLC1A4P43007 532 aa17■□□□□ 0.31
RTN3-205ENST00000356000 CDK7P50613 346 aa17■□□□□ 0.31
RTN3-205ENST00000356000 EHHADHQ08426 723 aa17■□□□□ 0.31
RTN3-205ENST00000356000 GIT2Q14161 759 aa17■□□□□ 0.31
RTN3-205ENST00000356000 PKN1Q16512 942 aa17■□□□□ 0.31
RTN3-205ENST00000356000 HLFQ16534 295 aa17■□□□□ 0.31
RTN3-205ENST00000356000 SLC44A4Q53GD3 710 aa17■□□□□ 0.31
RTN3-205ENST00000356000 TNFAIP8L3Q5GJ75 292 aa17■□□□□ 0.31
RTN3-205ENST00000356000 C6orf118Q5T5N4 469 aa17■□□□□ 0.31
RTN3-205ENST00000356000 TCERG1LQ5VWI1 586 aa17■□□□□ 0.31
RTN3-205ENST00000356000 TBC1D10AQ9BXI6 508 aa17■□□□□ 0.31
RTN3-205ENST00000356000 SLC26A6Q9BXS9 759 aa17■□□□□ 0.31
RTN3-205ENST00000356000 LUC7LQ9NQ29 371 aaKnown RBP17■□□□□ 0.31
RTN3-205ENST00000356000 PACSIN2Q9UNF0 486 aaPredicted RBP17■□□□□ 0.31
RTN3-205ENST00000356000 KCNJ14Q9UNX9 436 aa17■□□□□ 0.31
RTN3-205ENST00000356000 FGAP02671 866 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 RPN1P04843 607 aaKnown RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 ITGA6P23229 1130 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 NR5A1Q13285 461 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 TTLL12Q14166 644 aaPredicted RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 INF2Q27J81 1249 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 PDXDC2PQ6P474 469 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 ECHDC2Q86YB7 292 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 SCUBE1Q8IWY4 988 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 ACTRT1Q8TDG2 376 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 HAUS1Q96CS2 278 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 MYH6P13533 1939 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 TLDC2A0PJX2 215 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 PABPC4LP0CB38 370 aaKnown RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 VAV1P15498 845 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 CCDC6Q16204 474 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 RBM26Q5T8P6 1007 aaKnown RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 CROCCP2Q86T23 111 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 SPATA24Q86W54 205 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 ABTB1Q969K4 478 aaPredicted RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 TEKT1Q969V4 418 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 RNF25Q96BH1 459 aaPredicted RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 DDX50Q9BQ39 737 aaKnown RBP16.99■□□□□ 0.31
RTN3-205ENST00000356000 DDX21Q9NR30 783 aaKnown RBP eCLIP16.99■□□□□ 0.31
RTN3-205ENST00000356000 TBC1D7Q9P0N9 293 aa16.99■□□□□ 0.31
RTN3-205ENST00000356000 TRIM43BA6NCK2 446 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 CCDC188H7C350 402 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 RBAK-RBAKDNI3L0D1 243 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 ATP9BO43861 1147 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 UBTFL6P0CB48 400 aaPredicted RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 SESN3P58005 492 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 NAB2Q15742 525 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 TMEM259Q4ZIN3 620 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 RC3H1Q5TC82 1133 aaKnown RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 OLFML2BQ68BL8 750 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 MICU3Q86XE3 530 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 ZSCAN29Q8IWY8 852 aaPredicted RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 FMO2Q99518 471 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 NACA2Q9H009 215 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 PABPC3Q9H361 631 aaKnown RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 STK32BQ9NY57 414 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 COL24A1Q17RW2 1714 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 ZBTB43O43298 467 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 EYA4O95677 639 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 POTEJP0CG39 1038 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 SMARCA1P28370 1054 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 GFPT1Q06210 699 aaPredicted RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 MIIPQ5JXC2 388 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 LRRC74BQ6ZQY2 392 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 MARK2Q7KZI7 788 aaKnown RBP16.98■□□□□ 0.31
RTN3-205ENST00000356000 ERMNQ8TAM6 284 aa16.98■□□□□ 0.31
RTN3-205ENST00000356000 TAF4BQ92750 862 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms