RNA–Protein interactions for RNA: ENST00000354371.6

COPS8-201, Transcript of COP9 signalosome subunit 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS8, Length 4,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS8-201ENST00000354371 EXOC3L1Q86VI1 746 aa12.29□□□□□ -0.44
COPS8-201ENST00000354371 DDX42Q86XP3 938 aaKnown RBP eCLIP12.29□□□□□ -0.44
COPS8-201ENST00000354371 CCDC65Q8IXS2 484 aa12.29□□□□□ -0.44
COPS8-201ENST00000354371 MARCH10Q8NA82 808 aaPredicted RBP12.29□□□□□ -0.44
COPS8-201ENST00000354371 LNPEPQ9UIQ6 1025 aa12.29□□□□□ -0.44
COPS8-201ENST00000354371 GDAQ9Y2T3 454 aa12.29□□□□□ -0.44
COPS8-201ENST00000354371 AFDNP55196 1824 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 FAM13AO94988 1023 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 MRPS35P82673 323 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 CACNB1Q02641 598 aaPredicted RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 C6orf163Q5TEZ5 329 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 DPH6Q7L8W6 267 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 LRRC47Q8N1G4 583 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 EIF1ADQ8N9N8 165 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 PHACTR1Q9C0D0 580 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 ANKRD2Q9GZV1 360 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 ECT2Q9H8V3 914 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 SRGNP10124 158 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 TNFAIP3P21580 790 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 MMP13P45452 471 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 FOXO4P98177 505 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 GRM1Q13255 1194 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 USH1GQ495M9 461 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 TRIM42Q8IWZ5 723 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 SLC17A8Q8NDX2 589 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 ARHGEF2Q92974 986 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 STMN4Q9H169 189 aaPredicted RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 CTTNBP2NLQ9P2B4 639 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 PDHA1P08559 390 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 USP17L8P0C7I0 530 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 ATP11AP98196 1134 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 PABPC4Q13310 644 aaKnown RBP eCLIP12.28□□□□□ -0.44
COPS8-201ENST00000354371 LRRC23Q53EV4 343 aaPredicted RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 MIIPQ5JXC2 388 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 FRMPD2Q68DX3 1309 aaPredicted RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 PDXDC2PQ6P474 469 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 APLFQ8IW19 511 aaPredicted RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 CCDC105Q8IYK2 499 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 FITM2Q8N6M3 262 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 MAIP1Q8WWC4 291 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 LSM14BQ9BX40 385 aaKnown RBP12.28□□□□□ -0.44
COPS8-201ENST00000354371 PCDHA13Q9Y5I0 950 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 CD2APQ9Y5K6 639 aa12.28□□□□□ -0.44
COPS8-201ENST00000354371 DDX39AO00148 427 aaKnown RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 RGS16O15492 202 aaPredicted RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 PJA2O43164 708 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 CYP2D6P10635 497 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 CGB2Q6NT52 195 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 CAPN12Q6ZSI9 719 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 CNOT6LQ96LI5 555 aaKnown RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 CRAMP1Q96RY5 1269 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 GALNT8Q9NY28 637 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 PRKAG3Q9UGI9 489 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 FAM205CA6NFA0 338 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 SMCO2A6NFE2 343 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 FAM196BA6NMK8 535 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 GTPBP6O43824 516 aaPredicted RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 MMP1P03956 469 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 ZNF131P52739 623 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 TNIP1Q15025 636 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 TNFAIP8L3Q5GJ75 292 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 TMEM154Q6P9G4 183 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 SLF2Q8IX21 1173 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 PNMA1Q8ND90 353 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 U2AF1L4Q8WU68 220 aaKnown RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 ZSCAN10Q96SZ4 725 aaPredicted RBP12.27□□□□□ -0.44
COPS8-201ENST00000354371 NDNQ99608 321 aa12.27□□□□□ -0.44
COPS8-201ENST00000354371 BCORQ6W2J9 1755 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 TNS3Q68CZ2 1445 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 RGPD2P0DJD1 1756 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 ZNF804BA4D1E1 1349 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 SOS2Q07890 1332 aaPredicted RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 WDR19Q8NEZ3 1342 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 SNX3O60493 162 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 CHN1P15882 459 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 ACADSP16219 412 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 RXRBP28702 533 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 NONOQ15233 471 aaKnown RBP eCLIP12.27□□□□□ -0.45
COPS8-201ENST00000354371 TBC1D10BQ4KMP7 808 aaPredicted RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 STXBP4Q6ZWJ1 553 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 ENDOVQ8N8Q3 282 aaKnown RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 PROCA1Q8NCQ7 364 aaPredicted RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 SLC44A5Q8NCS7 719 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 OXER1Q8TDS5 423 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 SEC14L1Q92503 715 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 THAP9Q9H5L6 903 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 MTUS1Q9ULD2 1270 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 LRRD1A4D1F6 860 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 RASA1P20936 1047 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 EIF4BP23588 611 aaKnown RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 PRCPP42785 496 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 SESN3P58005 492 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 ATG9AQ7Z3C6 839 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 TMC3Q7Z5M5 1100 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 ASAP3Q8TDY4 903 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
COPS8-201ENST00000354371 SCAF8Q9UPN6 1271 aaKnown RBP12.27□□□□□ -0.45
COPS8-201ENST00000354371 RBM47A0AV96 593 aaKnown RBP12.26□□□□□ -0.45
COPS8-201ENST00000354371 WTIPA6NIX2 430 aaPredicted RBP12.26□□□□□ -0.45
COPS8-201ENST00000354371 NMT2O60551 498 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms