RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 PLS3P13797 630 aa22.66■■□□□ 1.22
TRIM4-202ENST00000354241 HOXD13P35453 343 aa22.66■■□□□ 1.22
TRIM4-202ENST00000354241 ZNF720Q7Z2F6 126 aa22.66■■□□□ 1.22
TRIM4-202ENST00000354241 AFAP1L1Q8TED9 768 aa22.66■■□□□ 1.22
TRIM4-202ENST00000354241 KATNBL1Q9H079 304 aa22.66■■□□□ 1.22
TRIM4-202ENST00000354241 K7ENM7 598 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 ADCYAP1R1P41586 468 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 MTIF2P46199 727 aaKnown RBP22.65■■□□□ 1.22
TRIM4-202ENST00000354241 FKBP3Q00688 224 aaKnown RBP22.65■■□□□ 1.22
TRIM4-202ENST00000354241 GJC2Q5T442 439 aaPredicted RBP22.65■■□□□ 1.22
TRIM4-202ENST00000354241 PPP4R3CPQ6ZMV5 832 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 LRRC55Q6ZSA7 311 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 RBM47A0AV96 593 aaKnown RBP22.65■■□□□ 1.22
TRIM4-202ENST00000354241 CA12O43570 354 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 DGAT1O75907 488 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 KCNA1Q09470 495 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 GLG1Q92896 1179 aa22.65■■□□□ 1.22
TRIM4-202ENST00000354241 ZHX1Q9UKY1 873 aaPredicted RBP22.65■■□□□ 1.22
TRIM4-202ENST00000354241 PES1O00541 588 aaKnown RBP22.64■■□□□ 1.21
TRIM4-202ENST00000354241 CALUO43852 315 aaPredicted RBP22.64■■□□□ 1.21
TRIM4-202ENST00000354241 PRKCSHP14314 528 aaPredicted RBP22.64■■□□□ 1.21
TRIM4-202ENST00000354241 ZSCAN30Q86W11 494 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 KSR1Q8IVT5 923 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 TUBGCP2Q9BSJ2 902 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 ATP6V0A4Q9HBG4 840 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 NRBP2Q9NSY0 501 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 PCDHB13Q9Y5F0 798 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 UBE4BO95155 1302 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 MGAMO43451 1857 aa22.64■■□□□ 1.21
TRIM4-202ENST00000354241 LGR5O75473 907 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 GH1P01241 217 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 TPM2P07951 284 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 PEX3P56589 373 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 GSDMDP57764 484 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ARHGAP1Q07960 439 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ACVR2BQ13705 512 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 EDRF1Q3B7T1 1238 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 TRIM50Q86XT4 487 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 MCPH1Q8NEM0 835 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 KCNF1Q9H3M0 494 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ABHD16BQ9H3Z7 469 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 TYW1Q9NV66 732 aaKnown RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 TRAF3IP3Q9Y228 551 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ZKSCAN5Q9Y2L8 839 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 C11orf97A0A1B0GVM6 126 aaPredicted RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 PDXKO00764 312 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 TNPO2O14787 897 aaKnown RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 AOC2O75106 756 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 MAPTP10636 758 aaKnown RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 MARK3P27448 753 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 POLGP54098 1239 aaPredicted RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 SOX10P56693 466 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 NOGQ13253 232 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 LAMC2Q13753 1193 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ARID5BQ14865 1188 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 SPECC1LQ69YQ0 1117 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 MSL3Q8N5Y2 521 aaKnown RBP22.63■■□□□ 1.21
TRIM4-202ENST00000354241 KIFAP3Q92845 792 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 CEP63Q96MT8 703 aa22.63■■□□□ 1.21
TRIM4-202ENST00000354241 ZMYM2Q9UBW7 1377 aa22.62■■□□□ 1.21
TRIM4-202ENST00000354241 DEFB115Q30KQ5 88 aa22.62■■□□□ 1.21
TRIM4-202ENST00000354241 FAM167AQ96KS9 214 aa22.62■■□□□ 1.21
TRIM4-202ENST00000354241 NIFKQ9BYG3 293 aaKnown RBP22.62■■□□□ 1.21
TRIM4-202ENST00000354241 XPNPEP1Q9NQW7 623 aa22.62■■□□□ 1.21
TRIM4-202ENST00000354241 PDLIM7Q9NR12 457 aa22.62■■□□□ 1.21
TRIM4-202ENST00000354241 EMSYQ7Z589 1322 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 ESPNB1AK53 854 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CYP2B6P20813 491 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 NR2F2P24468 414 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 UBXN1Q04323 297 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 ADAM9Q13443 819 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 EMC2Q15006 297 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 NOC4LQ9BVI4 516 aaKnown RBP22.61■■□□□ 1.21
TRIM4-202ENST00000354241 EIF2AK3Q9NZJ5 1116 aaKnown RBP22.61■■□□□ 1.21
TRIM4-202ENST00000354241 LGALS16A8MUM7 142 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CETN3O15182 167 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 ALDH1A1P00352 501 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 MSNP26038 577 aaKnown RBP22.61■■□□□ 1.21
TRIM4-202ENST00000354241 RGS2P41220 211 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 DMP1Q13316 513 aaPredicted RBP22.61■■□□□ 1.21
TRIM4-202ENST00000354241 ALCAMQ13740 583 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CCDC40Q4G0X9 1142 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 PLPPR4Q7Z2D5 763 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CACTINQ8WUQ7 758 aaKnown RBP22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CAPNS2Q96L46 248 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 STRA6Q9BX79 667 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 FLRT1Q9NZU1 646 aa22.61■■□□□ 1.21
TRIM4-202ENST00000354241 CCDC169A6NNP5 214 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 SLC16A4O15374 487 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 PPP1R37O75864 691 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 HOXC6P09630 235 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 PBX1P40424 430 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 LRMPQ12912 555 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 LRRC8AQ8IWT6 810 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 ZC3H3Q8IXZ2 948 aaKnown RBP22.6■■□□□ 1.21
TRIM4-202ENST00000354241 SOCS4Q8WXH5 440 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 USP6NLQ92738 828 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 POLR3FQ9H1D9 316 aaPredicted RBP22.6■■□□□ 1.21
TRIM4-202ENST00000354241 IKZF4Q9H2S9 585 aa22.6■■□□□ 1.21
TRIM4-202ENST00000354241 SMARCAD1Q9H4L7 1026 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms