RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 ZNF699Q32M78 642 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 ADCK5Q3MIX3 580 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 SWSAP1Q6NVH7 229 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 RMDN1Q96DB5 314 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 RMDN3Q96TC7 470 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 PNMA3Q9UL41 463 aa10.7□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L5A8MUK1 530 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 NDUFB5O43674 189 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 ATXN3P54252 364 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SNCBQ16143 134 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 DACH2Q96NX9 599 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 FAM217BQ9NTX9 383 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 ZC3H4Q9UPT8 1303 aaKnown RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 hCG_2014768A0A024R1R8 64 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 A0A0G2JND7 137 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 PLEKHA8P1O95397 391 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 ZBTB17Q13105 803 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 DDIASQ8IXT1 998 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 IL17REQ8NFR9 667 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SPON1Q9HCB6 807 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 KIAA0232Q92628 1395 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SYCE1LA8MT33 242 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 LMBRD2Q68DH5 695 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 KRT80Q6KB66 452 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 CCNYL1Q8N7R7 359 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 TMEM260Q9NX78 707 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 MAN1B1Q9UKM7 699 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 CLDN3O15551 220 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 ECE2O60344 883 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 PDE8BO95263 885 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 LONP1P36776 959 aaKnown RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 CRKP46108 304 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 GPC3P51654 580 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SAAL1Q96ER3 474 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 CDV3Q9UKY7 258 aaKnown RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 L3MBTL1Q9Y468 752 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 M0QYV0 167 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 HUS1O60921 280 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 GRAMD1BQ3KR37 738 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 LRRC8AQ8IWT6 810 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 EPAS1Q99814 870 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SAYSD1Q9NPB0 183 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 C6orf203Q9P0P8 240 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 FAN1Q9Y2M0 1017 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 FARP1Q9Y4F1 1045 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 PAMP19021 973 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 RFX3P48380 749 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 SPDYAQ5MJ70 313 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF746Q6NUN9 644 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 CROCCP2Q86T23 111 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 USP33Q8TEY7 942 aa10.69□□□□□ -0.7
COL11A1-201ENST00000353414 RRAGDQ9NQL2 400 aaPredicted RBP10.69□□□□□ -0.7
COL11A1-201ENST00000353414 BPIFB4P59827 614 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 TMEM270Q6UE05 265 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 CCDC124Q96CT7 223 aaKnown RBP10.68□□□□□ -0.7
COL11A1-201ENST00000353414 CACNA2D2Q9NY47 1150 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 ATP9BO43861 1147 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 SYNE4Q8N205 404 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 EMILIN3Q9NT22 766 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 EPB42P16452 691 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 ARHGAP18Q8N392 663 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 TDRD7Q8NHU6 1098 aaKnown RBP10.68□□□□□ -0.7
COL11A1-201ENST00000353414 TUBBP07437 444 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 GNAT1P11488 350 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 TUBB2AQ13885 445 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 AARS2Q5JTZ9 985 aaKnown RBP10.68□□□□□ -0.7
COL11A1-201ENST00000353414 MFSD14CQ5VZR4 134 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 AGAP3Q96P47 875 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 TUBB2BQ9BVA1 445 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 NHEJ1Q9H9Q4 299 aaPredicted RBP10.68□□□□□ -0.7
COL11A1-201ENST00000353414 GJB4Q9NTQ9 266 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 GCLMP48507 274 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 OR6J1Q8NGC5 347 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 OR6P1Q8NGX9 317 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 LMBRD1Q9NUN5 540 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 ANAPC7Q9UJX3 599 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 LEMD3Q9Y2U8 911 aa10.68□□□□□ -0.7
COL11A1-201ENST00000353414 SUN1O94901 812 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 CHRNA5P30532 468 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 EIF4A3P38919 411 aaKnown RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PWP1Q13610 501 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PPP2R5BQ15173 497 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SPATA1Q5VX52 437 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 P2RX5Q93086 422 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 KLHL29Q96CT2 875 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF274Q96GC6 653 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 BHMT2Q9H2M3 363 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L15C9J2P7 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L13C9JLJ4 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L11C9JVI0 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L18D6R9N7 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L22D6RA61 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L17D6RBQ6 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L19D6RCP7 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L20D6RJB6 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 SEC24DO94855 1032 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 MXI1P50539 228 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 ZNF157P51786 506 aaPredicted RBP10.67□□□□□ -0.7
COL11A1-201ENST00000353414 USP17L24Q0WX57 530 aa10.67□□□□□ -0.7
COL11A1-201ENST00000353414 PCSK7Q16549 785 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms