RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 SLC30A5Q8TAD4 765 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 LNX1Q8TBB1 728 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-202ENST00000352393 U2AF1L4Q8WU68 220 aaKnown RBP26.72■■□□□ 1.87
CPNE1-202ENST00000352393 CCT8L2Q96SF2 557 aa26.72■■□□□ 1.87
CPNE1-202ENST00000352393 POLR3CQ9BUI4 534 aaPredicted RBP26.72■■□□□ 1.87
CPNE1-202ENST00000352393 CTNNA1P35221 906 aaKnown RBP26.71■■□□□ 1.87
CPNE1-202ENST00000352393 BIRC3Q13489 604 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 MTMR3Q13615 1198 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 TEKT1Q969V4 418 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 SLC12A6Q9UHW9 1150 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 RBBP6Q7Z6E9 1792 aaKnown RBP26.71■■□□□ 1.87
CPNE1-202ENST00000352393 ANKRD31Q8N7Z5 1873 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 MYO1FO00160 1098 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 CLIC2O15247 247 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 FSBPO95073 299 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 FAM107AO95990 144 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 FOSP01100 380 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-202ENST00000352393 STAT1P42224 750 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 SEC24CP53992 1094 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 CYP4A11Q02928 519 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 DAAM2Q86T65 1068 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 CNPY4Q8N129 248 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 AMACRQ9UHK6 382 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 GGA2Q9UJY4 613 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 TTC7AQ9ULT0 858 aaPredicted RBP26.71■■□□□ 1.87
CPNE1-202ENST00000352393 RABGAP1Q9Y3P9 1069 aa26.71■■□□□ 1.87
CPNE1-202ENST00000352393 GAP43P17677 238 aa26.7■■□□□ 1.86
CPNE1-202ENST00000352393 HPDP32754 393 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-202ENST00000352393 FNTAP49354 379 aa26.7■■□□□ 1.86
CPNE1-202ENST00000352393 GALCP54803 685 aa26.7■■□□□ 1.86
CPNE1-202ENST00000352393 HDLBPQ00341 1268 aaKnown RBP26.7■■□□□ 1.86
CPNE1-202ENST00000352393 PROCA1Q8NCQ7 364 aaPredicted RBP26.7■■□□□ 1.86
CPNE1-202ENST00000352393 SPDYE3A6NKU9 549 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 EIF3DO15371 548 aaKnown RBP eCLIP26.69■■□□□ 1.86
CPNE1-202ENST00000352393 DAPK3O43293 454 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 FLT3P36888 993 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 NFIL3Q16649 462 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 TMC3Q7Z5M5 1100 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 SIAH1Q8IUQ4 282 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 OTUD6BQ8N6M0 293 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 PCDHB13Q9Y5F0 798 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 FAM196BA6NMK8 535 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 F8VZ95 297 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 EVI5O60447 810 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 POU5F1Q01860 360 aaKnown RBP26.69■■□□□ 1.86
CPNE1-202ENST00000352393 SLC15A2Q16348 729 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 AGBL2Q5U5Z8 902 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 RUFY4Q6ZNE9 571 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 CCDC26Q8TAB7 109 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 EIF2AK1Q9BQI3 630 aaKnown RBP26.69■■□□□ 1.86
CPNE1-202ENST00000352393 SYT11Q9BT88 431 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 SPATA31A6Q5VVP1 1343 aa26.69■■□□□ 1.86
CPNE1-202ENST00000352393 TTI1O43156 1089 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 SOX5P35711 763 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 SNAP25P60880 206 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 FBXW10Q5XX13 1052 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 FBXO11Q86XK2 927 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 KCTD17Q8N5Z5 321 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 PRPF38AQ8NAV1 312 aaKnown RBP26.68■■□□□ 1.86
CPNE1-202ENST00000352393 EML1O00423 815 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 POLD1P28340 1107 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 RINT1Q6NUQ1 792 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 KCNV1Q6PIU1 500 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 FAM186BQ8IYM0 893 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 RFFLQ8WZ73 363 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 CENPHQ9H3R5 247 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 AMFRQ9UKV5 643 aa26.68■■□□□ 1.86
CPNE1-202ENST00000352393 POLRMTO00411 1230 aaKnown RBP26.67■■□□□ 1.86
CPNE1-202ENST00000352393 TMEM253P0C7T8 217 aa26.67■■□□□ 1.86
CPNE1-202ENST00000352393 LMNB1P20700 586 aa26.67■■□□□ 1.86
CPNE1-202ENST00000352393 USH1GQ495M9 461 aa26.67■■□□□ 1.86
CPNE1-202ENST00000352393 CERKLQ49MI3 558 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-202ENST00000352393 UBLCP1Q8WVY7 318 aaPredicted RBP26.67■■□□□ 1.86
CPNE1-202ENST00000352393 ZC3H12CQ9C0D7 883 aaKnown RBP26.67■■□□□ 1.86
CPNE1-202ENST00000352393 FAM114A2Q9NRY5 505 aa26.67■■□□□ 1.86
CPNE1-202ENST00000352393 E7EVH7 732 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 OPLAHO14841 1288 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 BUB1BO60566 1050 aaPredicted RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 PSMC2P35998 433 aaKnown RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 MKNK1Q9BUB5 465 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 STK33Q9BYT3 514 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 IKZF4Q9H2S9 585 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 OSGEPQ9NPF4 335 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 CAPN7Q9Y6W3 813 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 FRMPD4Q14CM0 1322 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 IGSF9BQ9UPX0 1349 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 DDX3YO15523 660 aaKnown RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 CYP3A4P08684 503 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 HNRNPH1P31943 449 aaKnown RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 GTF2A1P52655 376 aaPredicted RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 ICA1Q05084 483 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 PPATQ06203 517 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 GLYCTKQ8IVS8 523 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 C3orf20Q8ND61 904 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 GMCL1P1Q8NEA9 526 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 CELF4Q9BZC1 486 aaKnown RBP26.66■■□□□ 1.86
CPNE1-202ENST00000352393 RGL1Q9NZL6 768 aa26.66■■□□□ 1.86
CPNE1-202ENST00000352393 CRKP46108 304 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 FMO5P49326 533 aa26.65■■□□□ 1.86
CPNE1-202ENST00000352393 DOK7Q18PE1 504 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms