RNA–Protein interactions for RNA: ENST00000351288.10

SMPD4-201, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2 BASIC

Gene SMPD4, Length 3,661 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-201ENST00000351288 CEP104O60308 925 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 NR3C1P04150 777 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 SNHG28P0DPA3 235 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 PDXDC1Q6P996 788 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 CCDC170Q8IYT3 715 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 DCPSQ96C86 337 aaKnown RBP11.35□□□□□ -0.59
SMPD4-201ENST00000351288 FAM84AQ96KN4 292 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 KCNH7Q9NS40 1196 aa11.35□□□□□ -0.59
SMPD4-201ENST00000351288 BCCIPQ9P287 314 aaKnown RBP eCLIP11.35□□□□□ -0.59
SMPD4-201ENST00000351288 PRELPP51888 382 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TMEM119Q4V9L6 283 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 PPP4R3AQ6IN85 833 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 ZNF746Q6NUN9 644 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 FAM160B2Q86V87 743 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 METTL13Q8N6R0 699 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 EHBP1Q8NDI1 1231 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 GBP3Q9H0R5 595 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TMX2Q9Y320 296 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 IGKV6D-41A0A0C4DH26 115 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TISP43B9A030 160 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 NOP56O00567 594 aaKnown RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 HNRNPDLO14979 420 aaKnown RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TNNI1P19237 187 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 HDLBPQ00341 1268 aaKnown RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 LRRC63Q05C16 580 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 HGSNATQ68CP4 663 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 POMGNT1Q8WZA1 660 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 FAM20AQ96MK3 541 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TLR10Q9BXR5 811 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 AJAP1Q9UKB5 411 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 POTEB2H3BUK9 544 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 SYF2O95926 243 aaKnown RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TNFAIP3P21580 790 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 NF2P35240 595 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 SMTNP53814 917 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 MKRN4PQ13434 485 aaPredicted RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 KNOP1Q1ED39 458 aaKnown RBP11.34□□□□□ -0.59
SMPD4-201ENST00000351288 GBP6Q6ZN66 633 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 MCF2L2Q86YR7 1114 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 TRIM58Q8NG06 486 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 IL31RAQ8NI17 732 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 FEM1BQ9UK73 627 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 HPCAL4Q9UM19 191 aa11.34□□□□□ -0.59
SMPD4-201ENST00000351288 HIP1RO75146 1068 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 CLK2P49760 499 aaKnown RBP11.33□□□□□ -0.59
SMPD4-201ENST00000351288 SF3A3Q12874 501 aaKnown RBP eCLIP11.33□□□□□ -0.591e-6■■■■□ 22.7
SMPD4-201ENST00000351288 MUM1L1Q5H9M0 696 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 SH2D3CQ8N5H7 860 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 RETREG2Q8NC44 543 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 NOX5Q96PH1 765 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 CAMKK2Q96RR4 588 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 KRT12Q99456 494 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 AP1M1Q9BXS5 423 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 GABBR1Q9UBS5 961 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 JRKLQ9Y4A0 524 aa11.33□□□□□ -0.59
SMPD4-201ENST00000351288 CEP350Q5VT06 3117 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 KCNK3O14649 394 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 AFPP02771 609 aaKnown RBP11.33□□□□□ -0.6
SMPD4-201ENST00000351288 PTK2Q05397 1052 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 SPDYE2Q495Y8 402 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 MOB2Q70IA6 237 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 FNBP1Q96RU3 617 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 ELP3Q9H9T3 547 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 NFU1Q9UMS0 254 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 ATP8B1O43520 1251 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 AKAP3O75969 853 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 FAM153BP0C7A2 387 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 STAT1P42224 750 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 ATP1A2P50993 1020 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 GUCY2DQ02846 1103 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 FAM153CQ494X1 144 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 KLHDC7AQ5VTJ3 777 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 TSEN2Q8NCE0 465 aaKnown RBP11.33□□□□□ -0.6
SMPD4-201ENST00000351288 NLGN2Q8NFZ4 835 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 HNRNPLLQ8WVV9 542 aaKnown RBP11.33□□□□□ -0.6
SMPD4-201ENST00000351288 UNC45AQ9H3U1 944 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 AS3MTQ9HBK9 375 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 FAM153AQ9UHL3 310 aa11.33□□□□□ -0.6
SMPD4-201ENST00000351288 SMARCA1P28370 1054 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CARSP49589 748 aaKnown RBP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CKAP4Q07065 602 aaKnown RBP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CCNI2Q6ZMN8 369 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 LEKR1Q6ZMV7 388 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 DDX42Q86XP3 938 aaKnown RBP eCLIP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 SMIM23A6NLE4 172 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 KRT14P02533 472 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 GLI1P08151 1106 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 VCAM1P19320 739 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 RPA1P27694 616 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 HOXD13P35453 343 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 COPB2P35606 906 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 POLGP54098 1239 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 MAP2K1Q02750 393 aaPredicted RBP11.32□□□□□ -0.6
SMPD4-201ENST00000351288 C8orf74Q6P047 294 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 EPB41L5Q9HCM4 733 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 CALCOCO1Q9P1Z2 691 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 SPATA31C1P0DKV0 1188 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 GIT2Q14161 759 aa11.32□□□□□ -0.6
SMPD4-201ENST00000351288 ZCWPW2Q504Y3 356 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms