RNA–Protein interactions for RNA: ENST00000350498.7

PDAP1-201, Transcript of PDGFA associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDAP1, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-201ENST00000350498 GRID2IPA4D2P6 1211 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 GCOM1H8Y6P7 765 aaPredicted RBP18.14■□□□□ 0.49
PDAP1-201ENST00000350498 CYP3A4P08684 503 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 POLR2MP0CAP2 368 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 TRIM49P0CI25 452 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 TRIM49CP0CI26 452 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 FOXR2Q6PJQ5 311 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 FIZ1Q96SL8 496 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 SH3GL2Q99962 352 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 EDEM3Q9BZQ6 932 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 ARHGEF10LQ9HCE6 1279 aa18.14■□□□□ 0.49
PDAP1-201ENST00000350498 PDXKO00764 312 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 FAM13AO94988 1023 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 MAGEA9P43362 315 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 CYP2J2P51589 502 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 EPHB4P54760 987 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 KLHL7Q8IXQ5 586 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 LARGE2Q8N3Y3 721 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 ZSWIM2Q8NEG5 633 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 POLR3CQ9BUI4 534 aaPredicted RBP18.13■□□□□ 0.49
PDAP1-201ENST00000350498 HOMER2Q9NSB8 354 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 GCNT4Q9P109 453 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 PIK3CDO00329 1044 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 GAS7O60861 476 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 EGFRP00533 1210 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 GRIPAP1Q4V328 841 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 FRMD5Q7Z6J6 570 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 LDHDQ86WU2 507 aa18.13■□□□□ 0.49
PDAP1-201ENST00000350498 TYW1Q9NV66 732 aaKnown RBP18.13■□□□□ 0.49
PDAP1-201ENST00000350498 ZNF233A6NK53 670 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 TMCO5BA8MYB1 307 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 NFIBO00712 420 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 LIG3P49916 1009 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CBWD6Q4V339 395 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CBWD3Q5JTY5 395 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CBWD5Q5RIA9 395 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CPXCR1Q8N123 301 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CASKIN2Q8WXE0 1202 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 ZNF577Q9BSK1 485 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 WDR11Q9BZH6 1224 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CALUO43852 315 aaPredicted RBP18.12■□□□□ 0.49
PDAP1-201ENST00000350498 GFPT2O94808 682 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 ITGB5P18084 799 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 PPFIA1Q13136 1202 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 SLC15A2Q16348 729 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CFAP221Q4G0U5 840 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 CEP55Q53EZ4 464 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 PLCD3Q8N3E9 789 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 FAM151AQ8WW52 585 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 SYN2Q92777 582 aaPredicted RBP18.12■□□□□ 0.49
PDAP1-201ENST00000350498 BORCS6Q96GS4 357 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 GMLQ99445 158 aa18.12■□□□□ 0.49
PDAP1-201ENST00000350498 ZEB2O60315 1214 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 NOP2P46087 812 aaKnown RBP18.11■□□□□ 0.49
PDAP1-201ENST00000350498 ITIH3Q06033 890 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 PPP4R3CPQ6ZMV5 832 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 PIK3R5Q8WYR1 880 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 SLC5A5Q92911 643 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 RANBP17Q9H2T7 1088 aaKnown RBP18.11■□□□□ 0.49
PDAP1-201ENST00000350498 TMOD2Q9NZR1 351 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 HERC5Q9UII4 1024 aaKnown RBP18.11■□□□□ 0.49
PDAP1-201ENST00000350498 EIF3HO15372 352 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDAP1-201ENST00000350498 HSF2BPO75031 334 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 DDX42Q86XP3 938 aaKnown RBP eCLIP18.11■□□□□ 0.49
PDAP1-201ENST00000350498 ELMO3Q96BJ8 720 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 RUFY1Q96T51 708 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 PCIF1Q9H4Z3 704 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 VCPKMTQ9H867 229 aa18.11■□□□□ 0.49
PDAP1-201ENST00000350498 RAD51CO43502 376 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 GUCY1A3Q02108 690 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 NNTQ13423 1086 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 EMBQ6PCB8 327 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 DAW1Q8N136 415 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 MICALL1Q8N3F8 863 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 LXNQ9BS40 222 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 GOPCQ9HD26 462 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 NAGPAQ9UK23 515 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 VIL1P09327 827 aaKnown RBP18.1■□□□□ 0.49
PDAP1-201ENST00000350498 PRELPP51888 382 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 DLG4P78352 724 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 ODR4Q5SWX8 454 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 MEI1Q5TIA1 1274 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 FZD1Q9UP38 647 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 FAM169AQ9Y6X4 670 aa18.1■□□□□ 0.49
PDAP1-201ENST00000350498 ATAD5Q96QE3 1844 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 IPO5O00410 1097 aaKnown RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 EPB41P11171 864 aaKnown RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 PPP2R5CQ13362 524 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 BMT2Q1RMZ1 405 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 SPDYE2Q495Y8 402 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 TTC31Q49AM3 519 aaPredicted RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 ALKBH5Q6P6C2 394 aaKnown RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 ZNF720Q7Z2F6 126 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 FAM186BQ8IYM0 893 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 RNF10Q8N5U6 811 aaKnown RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 OLIG1Q8TAK6 271 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 RNPC3Q96LT9 517 aaKnown RBP18.09■□□□□ 0.49
PDAP1-201ENST00000350498 AP1M1Q9BXS5 423 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 GDF3Q9NR23 364 aa18.09■□□□□ 0.49
PDAP1-201ENST00000350498 RBBP6Q7Z6E9 1792 aaKnown RBP18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms