RNA–Protein interactions for RNA: ENST00000350034.4

TRIM55-203, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,177 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-203ENST00000350034 KCNN1Q92952 543 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 CLMNQ96JQ2 1002 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 WDR24Q96S15 920 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 EIF3CQ99613 913 aaKnown RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 GANQ9H2C0 597 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 TAF1DQ9H5J8 278 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ELP3Q9H9T3 547 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 POLD4Q9HCU8 107 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PLCB1Q9NQ66 1216 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PDLIM7Q9NR12 457 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ZNHIT6Q9NWK9 470 aaKnown RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 CEP72Q9P209 647 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 ARMCX3Q9UH62 379 aaPredicted RBP7.61□□□□□ -1.19
TRIM55-203ENST00000350034 AGTPBP1Q9UPW5 1226 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PCDHB13Q9Y5F0 798 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 PCDHA10Q9Y5I2 948 aa7.61□□□□□ -1.19
TRIM55-203ENST00000350034 SSU72P8A0A1W2PR75 194 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GTPBP10A4D1E9 387 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 UNCXA6NJT0 531 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 BACH1O14867 736 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 DKC1O60832 514 aaKnown RBP eCLIP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 EIF3JO75822 258 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 SLU7O95391 586 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 EPB41P11171 864 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 COPB2P35606 906 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 CYLC1P35663 651 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 CASP4P49662 377 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ALDH5A1P51649 535 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 NCKAP1LP55160 1127 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GNG11P61952 73 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 SNRPFP62306 86 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 KRT83P78385 493 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GTF2BQ00403 316 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 CNTN2Q02246 1040 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 KCNH2Q12809 1159 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 PLS1Q14651 629 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 STXBP2Q15833 593 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GNPTABQ3T906 1256 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 HABP4Q5JVS0 413 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GPAT2Q6NUI2 795 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ABHD15Q6UXT9 468 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 MOB2Q70IA6 237 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ANO5Q75V66 913 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF710Q8N1W2 664 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 NEK11Q8NG66 645 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ANKRD7Q92527 254 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ATP6V0A1Q93050 837 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 SLC35C1Q96A29 364 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 OTUD5Q96G74 571 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ERO1AQ96HE7 468 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 PCMTD1Q96MG8 357 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 NTPCRQ9BSD7 190 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 SPATC1LQ9H0A9 340 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 GBP3Q9H0R5 595 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 NUCKS1Q9H1E3 243 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ASCC2Q9H1I8 757 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 HAUS4Q9H6D7 363 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 MMRN2Q9H8L6 949 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 NHEJ1Q9H9Q4 299 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 JPH1Q9HDC5 661 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 AGPAT3Q9NRZ7 376 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 FAM207AQ9NSI2 230 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ARHGAP20Q9P2F6 1191 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 LARSQ9P2J5 1176 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 CGNQ9P2M7 1197 aaKnown RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 MYO1AQ9UBC5 1043 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 FBXL5Q9UKA1 691 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF215Q9UL58 517 aaPredicted RBP7.6□□□□□ -1.19
TRIM55-203ENST00000350034 SAMM50Q9Y512 469 aa7.6□□□□□ -1.19
TRIM55-203ENST00000350034 IGSF9BQ9UPX0 1349 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 OTOFQ9HC10 1997 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 DNAJC25-GNG10A0A024R161 153 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 IGKV6D-21A0A0A0MT36 114 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TMEM150BA6NC51 233 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SOWAHBA6NEL2 793 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 LRRC53A6NM62 1247 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 RBAK-RBAKDNI3L0D1 243 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 ZNF263O14978 683 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 CLIC2O15247 247 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 MAPK13O15264 365 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 KIF5CO60282 957 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 TLR2O60603 784 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 USO1O60763 962 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SLC25A27O95847 323 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 ABL1P00519 1130 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 AFPP02771 609 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 PSAPP07602 524 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SUPT20HL2P0C7V6 817 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 XRCC5P13010 732 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 CASQ1P31415 396 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 PSMC2P35998 433 aaKnown RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 GJA5P36382 358 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 LBX1P52954 281 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 NPEPPSP55786 919 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 RTP1P59025 263 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 ACTR2P61160 394 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 IRX3P78415 501 aaPredicted RBP7.59□□□□□ -1.19
TRIM55-203ENST00000350034 SP2Q02086 613 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 PPP2R5AQ15172 486 aa7.59□□□□□ -1.19
TRIM55-203ENST00000350034 XKR9Q5GH70 373 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms