RNA–Protein interactions for RNA: ENST00000349663.6

KDM5C-201, Transcript of lysine demethylase 5C, humanhuman

TSL 4

Gene KDM5C, Length 548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5C-201ENST00000349663 HIDE1A8MVS5 230 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 DDX39AO00148 427 aaKnown RBP21.08■□□□□ 0.97
KDM5C-201ENST00000349663 ZNF76P36508 570 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 NAPAP54920 295 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 KRT17Q04695 432 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 FNDC1Q4ZHG4 1894 aaPredicted RBP21.08■□□□□ 0.97
KDM5C-201ENST00000349663 PDXDC2PQ6P474 469 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 FAM228AQ86W67 206 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 KMT2EQ8IZD2 1858 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 PPP1R16BQ96T49 567 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 OSMRQ99650 979 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 ANO3Q9BYT9 981 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 TMEM117Q9H0C3 514 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 ZNF302Q9NR11 478 aa21.08■□□□□ 0.97
KDM5C-201ENST00000349663 DMDP11532 3685 aa21.08■□□□□ 0.96
KDM5C-201ENST00000349663 PTPRZ1P23471 2315 aaPredicted RBP21.07■□□□□ 0.96
KDM5C-201ENST00000349663 ZBTB42B2RXF5 422 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 H0Y858 1186 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 HOXA2O43364 376 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 SP100P23497 879 aaPredicted RBP21.07■□□□□ 0.96
KDM5C-201ENST00000349663 COL9A3Q14050 684 aaPredicted RBP21.07■□□□□ 0.96
KDM5C-201ENST00000349663 DSC3Q14574 896 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 SWSAP1Q6NVH7 229 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 MIS18BP1Q6P0N0 1132 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 KCNT2Q6UVM3 1135 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 LRRC55Q6ZSA7 311 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 TMC7Q7Z402 723 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 CCDC60Q8IWA6 550 aaPredicted RBP21.07■□□□□ 0.96
KDM5C-201ENST00000349663 KREMEN2Q8NCW0 462 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 CASD1Q96PB1 797 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 TSHZ2Q9NRE2 1034 aa21.07■□□□□ 0.96
KDM5C-201ENST00000349663 GPR32O75388 356 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 PDGFBP01127 241 aaPredicted RBP21.06■□□□□ 0.96
KDM5C-201ENST00000349663 ATP4AP20648 1035 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 PPM1AP35813 382 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 SREBF1P36956 1147 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 ADCY7P51828 1080 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 TPRNQ4KMQ1 711 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 TYW1BQ6NUM6 668 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 PPP1R18Q6NYC8 613 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 SYNE3Q6ZMZ3 975 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 NIPA1Q7RTP0 329 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 MICU3Q86XE3 530 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 CKAP2LQ8IYA6 745 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 UBALD2Q8IYN6 164 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 METTL13Q8N6R0 699 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 CASP10Q92851 521 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 ZNF558Q96NG5 402 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 LRRC2Q9BYS8 371 aa21.06■□□□□ 0.96
KDM5C-201ENST00000349663 C22orf31O95567 290 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 VTNP04004 478 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 CES5AQ6NT32 575 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 SGMS1Q86VZ5 419 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 ABI1Q8IZP0 508 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 SPG21Q9NZD8 308 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 SORCS3Q9UPU3 1222 aa21.05■□□□□ 0.96
KDM5C-201ENST00000349663 SMCO2A6NFE2 343 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 SLC27A2O14975 620 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 DHX15O43143 795 aaKnown RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 GALR2O43603 387 aaPredicted RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 PBX3P40426 434 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 ITIH3Q06033 890 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 AP3B2Q13367 1082 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 MTMR3Q13615 1198 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 PLA2G4DQ86XP0 818 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 LRRC43Q8N309 656 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 MRPL43Q8N983 215 aaKnown RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 BBXQ8WY36 941 aaPredicted RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 NECTIN4Q96NY8 510 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 GLT8D2Q9H1C3 349 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 ADAM7Q9H2U9 754 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 RNF19AQ9NV58 838 aa21.04■□□□□ 0.96
KDM5C-201ENST00000349663 RBM28Q9NW13 759 aaKnown RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 MAFBQ9Y5Q3 323 aaPredicted RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 V9GY48 417 aaPredicted RBP21.04■□□□□ 0.96
KDM5C-201ENST00000349663 WDR87Q6ZQQ6 2873 aa21.03■□□□□ 0.96
KDM5C-201ENST00000349663 PROB1E7EW31 1015 aa21.03■□□□□ 0.96
KDM5C-201ENST00000349663 IPO5O00410 1097 aaKnown RBP21.03■□□□□ 0.96
KDM5C-201ENST00000349663 ZSCAN20P17040 1043 aaPredicted RBP21.03■□□□□ 0.96
KDM5C-201ENST00000349663 SMC1AQ14683 1233 aaKnown RBP21.03■□□□□ 0.96
KDM5C-201ENST00000349663 TRMT1LQ7Z2T5 733 aaKnown RBP21.03■□□□□ 0.96
KDM5C-201ENST00000349663 HCFC2Q9Y5Z7 792 aa21.03■□□□□ 0.96
KDM5C-201ENST00000349663 SPTBN4Q9H254 2564 aa21.03■□□□□ 0.96
KDM5C-201ENST00000349663 CNTNAP5Q8WYK1 1306 aa21.03■□□□□ 0.96
KDM5C-201ENST00000349663 FAM86B1E9PN63 330 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 BRD1O95696 1058 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 FAM86B2P0C5J1 330 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 CLK2P49760 499 aaKnown RBP21.02■□□□□ 0.96
KDM5C-201ENST00000349663 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 LSG1Q9H089 658 aaKnown RBP21.02■□□□□ 0.96
KDM5C-201ENST00000349663 POMKQ9H5K3 350 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 BARHL2Q9NY43 387 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 CDH22Q9UJ99 828 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 CEP131Q9UPN4 1083 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 EVPLQ92817 2033 aa21.02■□□□□ 0.96
KDM5C-201ENST00000349663 RIF1Q5UIP0 2472 aaKnown RBP21.01■□□□□ 0.95
KDM5C-201ENST00000349663 C2orf71A6NGG8 1288 aa21.01■□□□□ 0.95
KDM5C-201ENST00000349663 C2CD4DB7Z1M9 353 aa21.01■□□□□ 0.95
KDM5C-201ENST00000349663 hCG_1984214I3L0E3 225 aa21.01■□□□□ 0.95
KDM5C-201ENST00000349663 MAGEB2O15479 319 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms