RNA–Protein interactions for RNA: ENST00000349124.2

PTP4A3-202, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 1 (best) BASIC

Gene PTP4A3, Length 2,710 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-202ENST00000349124 PLS1Q14651 629 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 CBWD6Q4V339 395 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 CBWD3Q5JTY5 395 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 CBWD5Q5RIA9 395 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 FBXW10Q5XX13 1052 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 NT5DC3Q86UY8 548 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 DYDC2Q96IM9 177 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 GLT8D2Q9H1C3 349 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 PI4KBQ9UBF8 816 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 STXBP5LQ9Y2K9 1186 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 NFS1Q9Y697 457 aa19.72■□□□□ 0.75
PTP4A3-202ENST00000349124 BUB1BO60566 1050 aaPredicted RBP19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 SLITRK3O94933 977 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 CYP2J2P51589 502 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 C10orf76Q5T2E6 689 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 SYDE2Q5VT97 1194 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 CD302Q8IX05 232 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 WDR18Q9BV38 432 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 WRAP73Q9P2S5 460 aaPredicted RBP19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 FBXL5Q9UKA1 691 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 SMCHD1A6NHR9 2005 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 TULP1O00294 542 aaPredicted RBP19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 GH2P01242 217 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 MOXD1Q6UVY6 613 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 FAM186BQ8IYM0 893 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 SLC35G2Q8TBE7 412 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 TMBIM4Q9HC24 238 aa19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 CHORDC1Q9UHD1 332 aaPredicted RBP19.71■□□□□ 0.75
PTP4A3-202ENST00000349124 DCDC2CA8MYV0 355 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 TOM1O60784 492 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 EYA4O95677 639 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 RPL13P26373 211 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 TMOD1P28289 359 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 DRAP1Q14919 205 aaPredicted RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 SLFN11Q7Z7L1 901 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 FAM20AQ96MK3 541 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 PPANQ9NQ55 473 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 ZMYM2Q9UBW7 1377 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 TBX3O15119 743 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 ERLIN2O94905 339 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 CFBP00751 764 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 ZNF211Q13398 564 aaPredicted RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 PRPF4BQ13523 1007 aaKnown RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 KIAA1755Q5JYT7 1200 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 BANK1Q8NDB2 785 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 UBLCP1Q8WVY7 318 aaPredicted RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 ARHGEF26Q96DR7 871 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 GJD4Q96KN9 370 aaPredicted RBP19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 ZDHHC15Q96MV8 337 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 HSD17B14Q9BPX1 270 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 TRIM51Q9BSJ1 452 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.7■□□□□ 0.741e-6■■■■■ 40.8
PTP4A3-202ENST00000349124 DNAJC12Q9UKB3 198 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 TAF1LQ8IZX4 1826 aa19.7■□□□□ 0.74
PTP4A3-202ENST00000349124 UBAP1LF5GYI3 381 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 PPP1R37O75864 691 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 FAM13AO94988 1023 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 FGGP02679 453 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 CTNNA1P35221 906 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 MDH1P40925 334 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 ECE1P42892 770 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 ZNF844Q08AG5 666 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 PTGISQ16647 500 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 ARHGAP44Q17R89 818 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 BMT2Q1RMZ1 405 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 ABCB5Q2M3G0 1257 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 AADACL2Q6P093 401 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 SEPT12Q8IYM1 358 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 TDRD3Q9H7E2 651 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 METTL14Q9HCE5 456 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 IGLV3-22A0A075B6J6 115 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 MYO1FO00160 1098 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 HDLBPQ00341 1268 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 DCAF12L1Q5VU92 463 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 CHADLQ6NUI6 762 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 C1orf186Q6ZWK4 172 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 MAEAQ7L5Y9 396 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 SLC30A5Q8TAD4 765 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 CCT8L2Q96SF2 557 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 EPN3Q9H201 632 aa19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 SEPT11Q9NVA2 429 aaKnown RBP19.69■□□□□ 0.74
PTP4A3-202ENST00000349124 MYH4Q9Y623 1939 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 OTOP1Q7RTM1 612 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 GPR88Q9GZN0 384 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 F8VZ95 297 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 BMP3P12645 472 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 INPP5BP32019 993 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 CIITAP33076 1130 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 STAT1P42224 750 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 IFI16Q16666 785 aaKnown RBP19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 TATDN1Q6P1N9 297 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 ZNF473Q8WTR7 871 aaKnown RBP19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 SUCLA2Q9P2R7 463 aaPredicted RBP19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 PRR12Q9ULL5 1215 aa19.68■□□□□ 0.74
PTP4A3-202ENST00000349124 TISP43B9A030 160 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 CES2O00748 559 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 SOX5P35711 763 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 FMO5P49326 533 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 GLG1Q92896 1179 aa19.67■□□□□ 0.74
PTP4A3-202ENST00000349124 HES6Q96HZ4 224 aa19.67■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms