RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 NHSQ6T4R5 1651 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 NAV1Q8NEY1 1877 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 TLDC2A0PJX2 215 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 EIF4E1BA6NMX2 242 aaKnown RBP20.26■□□□□ 0.83
SCARF1-202ENST00000348987 KLHL30Q0D2K2 578 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 COBLL1Q53SF7 1204 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 CALR3Q96L12 384 aaKnown RBP20.26■□□□□ 0.83
SCARF1-202ENST00000348987 GPCPD1Q9NPB8 672 aa20.26■□□□□ 0.83
SCARF1-202ENST00000348987 SMIM23A6NLE4 172 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 RIMBP2O15034 1052 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 UBOX5O94941 541 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 FGFR1OPO95684 399 aaKnown RBP20.25■□□□□ 0.83
SCARF1-202ENST00000348987 ALADP13716 330 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 ECM1Q16610 540 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 SV2BQ7L1I2 683 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 ADAM7Q9H2U9 754 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 POLLQ9UGP5 575 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 ABCB11O95342 1321 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 AP1G2O75843 785 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 UBE2SQ16763 222 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 THEMIS2Q5TEJ8 643 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 ERICH1Q86X53 443 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 SYN2Q92777 582 aaPredicted RBP20.25■□□□□ 0.83
SCARF1-202ENST00000348987 NUCKS1Q9H1E3 243 aaKnown RBP20.25■□□□□ 0.83
SCARF1-202ENST00000348987 RIOX1Q9H6W3 641 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 THSD7AQ9UPZ6 1657 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 MYH1P12882 1939 aa20.25■□□□□ 0.83
SCARF1-202ENST00000348987 RARAP10276 462 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 HSPA1LP34931 641 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 IFNAR2P48551 515 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 NCALDP61601 193 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 SLMAPQ14BN4 828 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 LARP4BQ92615 738 aaKnown RBP20.24■□□□□ 0.83
SCARF1-202ENST00000348987 TRIM51Q9BSJ1 452 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 FAM167BQ9BTA0 163 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 CD2APQ9Y5K6 639 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 IGF2BP3O00425 579 aaKnown RBP eCLIP20.24■□□□□ 0.83
SCARF1-202ENST00000348987 UPP2O95045 317 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 MMP13P45452 471 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 NT5C2P49902 561 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 KIF2BQ8N4N8 673 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 MXD3Q9BW11 206 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 GOPCQ9HD26 462 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 CORO1CQ9ULV4 474 aaPredicted RBP20.24■□□□□ 0.83
SCARF1-202ENST00000348987 UTP11Q9Y3A2 253 aaKnown RBP20.24■□□□□ 0.83
SCARF1-202ENST00000348987 TAF1LQ8IZX4 1826 aa20.24■□□□□ 0.83
SCARF1-202ENST00000348987 C6orf229H3BNL8 230 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 AKR1B1P15121 316 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 TNNI2P48788 182 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 EIF3BP55884 814 aaKnown RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 IFI35P80217 286 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 CCDC26Q8TAB7 109 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 FMO2Q99518 471 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 ECT2Q9H8V3 914 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 INTS9Q9NV88 658 aaKnown RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 MTMR4Q9NYA4 1195 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 STK38LQ9Y2H1 464 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 CCDC188H7C350 402 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 PPP1R11O60927 126 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 IL1R1P14778 569 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 CCND1P24385 295 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 LRRC63Q05C16 580 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 TTBK2Q6IQ55 1244 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 HOOK3Q86VS8 718 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 GUF1Q8N442 669 aaKnown RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 GGA1Q9UJY5 639 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 SPATA31A6Q5VVP1 1343 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 ZBTB48P10074 688 aaPredicted RBP20.23■□□□□ 0.83
SCARF1-202ENST00000348987 LRRC57Q8N9N7 239 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 DDX12PQ92771 950 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 HOMER3Q9NSC5 361 aa20.23■□□□□ 0.83
SCARF1-202ENST00000348987 ANKRD33BA6NCL7 494 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 PPFIA2O75334 1257 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 KRT16P08779 473 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 SLC16A2P36021 539 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 C15orf52Q6ZUT6 534 aaKnown RBP20.22■□□□□ 0.83
SCARF1-202ENST00000348987 UNC13DQ70J99 1090 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 SNX29Q8TEQ0 813 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 FAM114A2Q9NRY5 505 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 DAGLAQ9Y4D2 1042 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 CDK5RAP2Q96SN8 1893 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 LINGO3P0C6S8 592 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 ABL2P42684 1182 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 NOVP48745 357 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 ANKRD20A2Q5SQ80 823 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 ANKRD20A1Q5TYW2 823 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 ANKRD20A3Q5VUR7 823 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 DPP8Q6V1X1 898 aaPredicted RBP20.22■□□□□ 0.83
SCARF1-202ENST00000348987 MAEAQ7L5Y9 396 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 SEC14L1Q92503 715 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 CDK5RAP3Q96JB5 506 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 FGFBP2Q9BYJ0 223 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 EPB41L4BQ9H329 900 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 AZI2Q9H6S1 392 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 DDX4Q9NQI0 724 aaKnown RBP20.22■□□□□ 0.83
SCARF1-202ENST00000348987 ETAA1Q9NY74 926 aa20.22■□□□□ 0.83
SCARF1-202ENST00000348987 UTRNP46939 3433 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 ADCY7P51828 1080 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 GTF2IP78347 998 aa20.21■□□□□ 0.83
SCARF1-202ENST00000348987 PTK2Q05397 1052 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms