RNA–Protein interactions for RNA: ENST00000348639.7

CHRNA3-202, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA3, Length 2,030 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-202ENST00000348639 ATP9AO75110 1047 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 MAPTP10636 758 aaKnown RBP22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 SLC9A1P19634 815 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 JAK3P52333 1124 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 GFPT1Q06210 699 aaPredicted RBP22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 KLHDC7AQ5VTJ3 777 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 TCERG1LQ5VWI1 586 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 GPIHBP1Q8IV16 184 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 KSR1Q8IVT5 923 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 C4orf19Q8IY42 314 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 FAM186BQ8IYM0 893 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 TRIM58Q8NG06 486 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 AGPAT3Q9NRZ7 376 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 LARSQ9P2J5 1176 aaKnown RBP22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CTAGE15A4D2H0 777 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 SPDYE4A6NLX3 237 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 ATP2A1O14983 1001 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CTAGE8P0CG41 777 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CCND2P30279 289 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 SFNP31947 248 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 KRT76Q01546 638 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 RAPGEF1Q13905 1077 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 GBP6Q6ZN66 633 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CATSPERGQ6ZRH7 1159 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CTAGE6Q86UF2 777 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 VSIG10LQ86VR7 867 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 CTAGE4Q8IX94 777 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 FBXL5Q9UKA1 691 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 PHIPQ8WWQ0 1821 aa22.31■■□□□ 1.16
CHRNA3-202ENST00000348639 DICER1Q9UPY3 1922 aaKnown RBP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 COL11A1P12107 1806 aaPredicted RBP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 TFRCP02786 760 aaKnown RBP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 ACTN1P12814 892 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 UCHL3P15374 230 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 YWHABP31946 246 aaKnown RBP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 ALCAMQ13740 583 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 PLS1Q14651 629 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 PARD6BQ9BYG5 372 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 HDAC6Q9UBN7 1215 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 AFG3L2Q9Y4W6 797 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 WDR64B1ANS9 1081 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 MAFGO15525 162 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 TACC1O75410 805 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 USP2O75604 605 aaPredicted RBP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 PSMC5P62195 406 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 TMEM132BQ14DG7 1078 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 ASIC2Q16515 512 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 TMCO3Q6UWJ1 677 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 SLC9A9Q8IVB4 645 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 GPRASP2Q96D09 838 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 TIPINQ9BVW5 301 aa22.3■■□□□ 1.16
CHRNA3-202ENST00000348639 CCNE2O96020 404 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 NR3C2P08235 984 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 KLHL30Q0D2K2 578 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 MYBPC2Q14324 1141 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 TRMT1LQ7Z2T5 733 aaKnown RBP22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 FAM133AQ8N9E0 248 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 RDM1Q8NG50 284 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 RNF181Q9P0P0 153 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 TCEAL9Q9UHQ7 104 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 FRMD4BQ9Y2L6 1034 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 MYH11P35749 1972 aa22.29■■□□□ 1.16
CHRNA3-202ENST00000348639 POTEB2H3BUK9 544 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 K7ENM7 598 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 PLS3P13797 630 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 UGCGQ16739 394 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 MAEAQ7L5Y9 396 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 TEX13BQ9BXU2 312 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 MAF1Q9H063 256 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 LUC7LQ9NQ29 371 aaKnown RBP22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 FAM53CQ9NYF3 392 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 JRKLQ9Y4A0 524 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 ZRANB2O95218 330 aaKnown RBP eCLIP22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 CBX1P83916 185 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SLC18A3Q16572 532 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 NLRX1Q86UT6 975 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SYCP3Q8IZU3 236 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 NSUN6Q8TEA1 469 aaKnown RBP22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 INPP4AQ96PE3 977 aaPredicted RBP22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SPAG5Q96R06 1193 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SENP7Q9BQF6 1050 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 MLXIPQ9HAP2 919 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SIX2Q9NPC8 291 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 HOXC10Q9NYD6 342 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 GCNT4Q9P109 453 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 FHOD1Q9Y613 1164 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 CAPN6Q9Y6Q1 641 aa22.28■■□□□ 1.16
CHRNA3-202ENST00000348639 SBF1O95248 1867 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 MYPNQ86TC9 1320 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 VGLL4Q14135 290 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 ZNF746Q6NUN9 644 aaPredicted RBP22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 MSANTD4Q8NCY6 345 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 TMEM174Q8WUU8 243 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 DCPSQ96C86 337 aaKnown RBP22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 CCDC43Q96MW1 224 aaKnown RBP22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 TMEM206Q9H813 350 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 ANKZF1Q9H8Y5 726 aa22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 ADARB2Q9NS39 739 aaKnown RBP22.27■■□□□ 1.16
CHRNA3-202ENST00000348639 ANKEF1Q9NU02 776 aa22.27■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms