RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 PSEN2P49810 448 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 MFSD10Q14728 455 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 LRRC41Q15345 812 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 KCNA10Q16322 511 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 KIAA0753Q2KHM9 967 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 RNF180Q86T96 592 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 MTG1Q9BT17 334 aaPredicted RBP30.03■■■□□ 2.4
SSBP4-202ENST00000348495 KATNAL1Q9BW62 490 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 ATP6V0A4Q9HBG4 840 aa30.03■■■□□ 2.4
SSBP4-202ENST00000348495 HIP1RO75146 1068 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 MAFO75444 373 aaPredicted RBP30.02■■■□□ 2.4
SSBP4-202ENST00000348495 CCDC192P0DO97 292 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 CCL5P13501 91 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 COASYQ13057 564 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 ISM2Q6H9L7 571 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 CCDC65Q8IXS2 484 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 PCSK9Q8NBP7 692 aaKnown RBP30.02■■■□□ 2.4
SSBP4-202ENST00000348495 MCPH1Q8NEM0 835 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 SCN10AQ9Y5Y9 1956 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 POLGP54098 1239 aaPredicted RBP30.02■■■□□ 2.4
SSBP4-202ENST00000348495 NLRP12P59046 1061 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 EMC2Q15006 297 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 CXCL17Q6UXB2 119 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 ARMC5Q96C12 935 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 POLD4Q9HCU8 107 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 EXOC1Q9NV70 894 aa30.02■■■□□ 2.4
SSBP4-202ENST00000348495 IGKV6-21A0A0C4DH24 114 aa30.01■■■□□ 2.39
SSBP4-202ENST00000348495 ASGR1P07306 291 aa30.01■■■□□ 2.39
SSBP4-202ENST00000348495 TRAPPC12Q8WVT3 735 aa30.01■■■□□ 2.39
SSBP4-202ENST00000348495 SLC7A3Q8WY07 619 aa30.01■■■□□ 2.39
SSBP4-202ENST00000348495 CCDC47Q96A33 483 aaKnown RBP30.01■■■□□ 2.39
SSBP4-202ENST00000348495 ZNF333Q96JL9 665 aa30.01■■■□□ 2.39
SSBP4-202ENST00000348495 TBCAO75347 108 aaKnown RBP30■■■□□ 2.39
SSBP4-202ENST00000348495 TBC1D8BQ0IIM8 1120 aa30■■■□□ 2.39
SSBP4-202ENST00000348495 STX1AQ16623 288 aa30■■■□□ 2.39
SSBP4-202ENST00000348495 PCDHA2Q9Y5H9 948 aa30■■■□□ 2.39
SSBP4-202ENST00000348495 COL4A3BPQ9Y5P4 624 aa30■■■□□ 2.39
SSBP4-202ENST00000348495 GAP43P17677 238 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 PPFIA1Q13136 1202 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 DPCR1Q3MIW9 517 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 ZNF658Q5TYW1 1059 aaPredicted RBP29.99■■■□□ 2.39
SSBP4-202ENST00000348495 MAEAQ7L5Y9 396 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 EXOC8Q8IYI6 725 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 TSEN34Q9BSV6 310 aaKnown RBP29.99■■■□□ 2.39
SSBP4-202ENST00000348495 PARVGQ9HBI0 331 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 GPRC5CQ9NQ84 441 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 FAM13AO94988 1023 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 C22orf31O95567 290 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 SMIM10L2AP0DMW4 78 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 SMIM10L2BP0DMW5 78 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 GRIK4Q16099 956 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 HPS3Q969F9 1004 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 DRC1Q96MC2 740 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 RNF208Q9H0X6 261 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 PRDM10Q9NQV6 1147 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 ANO10Q9NW15 660 aa29.99■■■□□ 2.39
SSBP4-202ENST00000348495 SFI1A8K8P3 1242 aa29.98■■■□□ 2.39
SSBP4-202ENST00000348495 PSMD2Q13200 908 aa29.98■■■□□ 2.39
SSBP4-202ENST00000348495 HERC4Q5GLZ8 1057 aaPredicted RBP29.98■■■□□ 2.39
SSBP4-202ENST00000348495 MARCH8Q5T0T0 291 aa29.98■■■□□ 2.39
SSBP4-202ENST00000348495 FAM102BQ5T8I3 360 aa29.98■■■□□ 2.39
SSBP4-202ENST00000348495 NRCAMQ92823 1304 aa29.98■■■□□ 2.39
SSBP4-202ENST00000348495 MYCP01106 439 aaPredicted RBP29.97■■■□□ 2.39
SSBP4-202ENST00000348495 HOXC8P31273 242 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 SOX10P56693 466 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 RTP1P59025 263 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 STK4Q13043 487 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 SFR1Q86XK3 245 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 ARRDC4Q8NCT1 418 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 KIFAP3Q92845 792 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 DEFB118Q96PH6 123 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 GTPBP4Q9BZE4 634 aaKnown RBP29.97■■■□□ 2.39
SSBP4-202ENST00000348495 ZHX3Q9H4I2 956 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 OLFML3Q9NRN5 406 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 GDAQ9Y2T3 454 aa29.97■■■□□ 2.39
SSBP4-202ENST00000348495 RRN3P2A6NIE6 340 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 GAS2O43903 313 aaKnown RBP29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MYCNP04198 464 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-202ENST00000348495 ACLYP53396 1101 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MKRN4PQ13434 485 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-202ENST00000348495 FAM26FQ5R3K3 315 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 KIAA0895Q8NCT3 520 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 LMBR1Q8WVP7 490 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 FIZ1Q96SL8 496 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 JPH2Q9BR39 696 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-202ENST00000348495 SETD4Q9NVD3 440 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 SEL1LQ9UBV2 794 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MOXD2PA6NHM9 499 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MAGEB2O15479 319 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 ARL2P36404 184 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 IGBP1P78318 339 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 ADAM17P78536 824 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 SMYD4Q8IYR2 804 aaPredicted RBP29.96■■■□□ 2.39
SSBP4-202ENST00000348495 LINC01465Q8N7H1 131 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MLKLQ8NB16 471 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 OGDHLQ9ULD0 1010 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 MYH11P35749 1972 aa29.96■■■□□ 2.39
SSBP4-202ENST00000348495 CABYRO75952 493 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 PLS3P13797 630 aa29.95■■■□□ 2.38
SSBP4-202ENST00000348495 KLRC1P26715 233 aa29.95■■■□□ 2.38
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms