RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 CCNI2Q6ZMN8 369 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 GADL1Q6ZQY3 521 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 NSUN4Q96CB9 384 aaKnown RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 FUT8Q9BYC5 575 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 INO80BQ9C086 356 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 CNOT8Q9UFF9 292 aaKnown RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 ZBTB5O15062 677 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 SASH3O75995 380 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 ABL1P00519 1130 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 ITKQ08881 620 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 DARS2Q6PI48 645 aaKnown RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 MCUQ8NE86 351 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 C11orf70Q9BRQ4 267 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 TRPA1O75762 1119 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 MYBP10242 640 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 MYO1EQ12965 1108 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 CYFIP1Q7L576 1253 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 NIM1KQ8IY84 436 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 KCTD6Q8NC69 237 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 IFT122Q9HBG6 1241 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 GPSM2P81274 684 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 GABPAQ06546 454 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 FOXD4Q12950 439 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 GRAPQ13588 217 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 CUL1Q13616 776 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 KNOP1Q1ED39 458 aaKnown RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 KIRREL3Q8IZU9 778 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 GRAPLQ8TC17 118 aaPredicted RBP11.28□□□□□ -0.6
SMG7-201ENST00000347615 SPIRE2Q8WWL2 714 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 SH3GLB2Q9NR46 395 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 PNMA2Q9UL42 364 aa11.28□□□□□ -0.6
SMG7-201ENST00000347615 PABPN1LA6NDY0 278 aaKnown RBP11.27□□□□□ -0.6
SMG7-201ENST00000347615 PMS1P54277 932 aaKnown RBP11.27□□□□□ -0.6
SMG7-201ENST00000347615 PDE1BQ01064 536 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 NCAPHQ15003 741 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 QRICH1Q2TAL8 776 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 EPC2Q52LR7 807 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 TRIM50Q86XT4 487 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 FOXP4Q8IVH2 680 aaPredicted RBP11.27□□□□□ -0.6
SMG7-201ENST00000347615 ARHGAP24Q8N264 748 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 KIF2BQ8N4N8 673 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 CCNYQ8ND76 341 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 FAM213AQ9BRX8 229 aa11.27□□□□□ -0.6
SMG7-201ENST00000347615 FNDC3AQ9Y2H6 1198 aaKnown RBP11.27□□□□□ -0.6
SMG7-201ENST00000347615 STK10O94804 968 aaKnown RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 SLC4A1P02730 911 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 ARHGAP4P98171 946 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 CEP128Q6ZU80 1094 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 PPP4R1Q8TF05 950 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 ZNF473Q8WTR7 871 aaKnown RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 RNPC3Q96LT9 517 aaKnown RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 CD209Q9NNX6 404 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 USP31Q70CQ4 1352 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 ANO9A1A5B4 782 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 CLGNO14967 610 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 CFLARO15519 480 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 TNNC2P02585 160 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 NCF2P19878 526 aaPredicted RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 COG7P83436 770 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 ARHGEF18Q6ZSZ5 1173 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 PACSIN1Q9BY11 444 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 ECT2Q9H8V3 914 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 RNF8O76064 485 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 SRGNP10124 158 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 GAP43P17677 238 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 RWDD2BP57060 319 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 SLC8A3P57103 927 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 CCDC137Q6PK04 289 aaKnown RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 ADGRA1Q86SQ6 560 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 CCT6BQ92526 530 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 RUNDC3BQ96NL0 473 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.27□□□□□ -0.613e-6■■□□□ 11.9
SMG7-201ENST00000347615 SMYD3Q9H7B4 428 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 RAVER2Q9HCJ3 691 aaKnown RBP11.27□□□□□ -0.61
SMG7-201ENST00000347615 CD248Q9HCU0 757 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 PCSK1NQ9UHG2 260 aa11.27□□□□□ -0.61
SMG7-201ENST00000347615 FOSP01100 380 aaPredicted RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 LRRC31Q6UY01 552 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 RAPH1Q70E73 1250 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 ANKMY2Q8IV38 441 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 CAPN6Q9Y6Q1 641 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 SPATA31A3Q5VYP0 1347 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 BAZ2BQ9UIF8 2168 aaKnown RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 ZSCAN5CA6NGD5 496 aaPredicted RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 WTIPA6NIX2 430 aaPredicted RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 PI4K2BG5E9Z4 385 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 GCFC2P16383 781 aaKnown RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 KCNJ1P48048 391 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 ALX1Q15699 326 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 C2CD6Q53TS8 623 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 DNAJC24Q6P3W2 148 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 CDAN1Q8IWY9 1227 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 PIP4K2CQ8TBX8 421 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 IL17RAQ96F46 866 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 DDX23Q9BUQ8 820 aaKnown RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 INTS2Q9H0H0 1204 aaKnown RBP11.26□□□□□ -0.61
SMG7-201ENST00000347615 OVOS2A0A0J9YW53 1432 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 OVOS2Q6IE36 1432 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 CAPN9O14815 690 aa11.26□□□□□ -0.61
SMG7-201ENST00000347615 CYP26A1O43174 497 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms