RNA–Protein interactions for RNA: ENST00000346501.8

TSPAN4-201, Transcript of tetraspanin 4, humanhuman

TSL 3 BASIC

Gene TSPAN4, Length 882 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-201ENST00000346501 TCTN1Q2MV58 587 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 LRRC71Q8N4P6 559 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 MAFAQ8NHW3 353 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 NLRP7Q8WX94 980 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 DYDC2Q96IM9 177 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 RAB34Q9BZG1 259 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 INO80BQ9C086 356 aaPredicted RBP17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 CYP26B1Q9NR63 512 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 LRFN2Q9ULH4 789 aa17.65■□□□□ 0.42
TSPAN4-201ENST00000346501 ENPP3O14638 875 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 GAS2O43903 313 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 OR52Z1P0C646 297 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 U2AF2P26368 475 aaKnown RBP eCLIP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 YWHABP31946 246 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 RFC5P40937 340 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 CYP4A11Q02928 519 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 TARBP2Q15633 366 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 TMCO2Q7Z6W1 182 aaPredicted RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 ARNTL2Q8WYA1 636 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 TGS1Q96RS0 853 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 PPP1R16BQ96T49 567 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 OSMRQ99650 979 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 EIF2AK1Q9BQI3 630 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 AGO3Q9H9G7 860 aaKnown RBP17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 C1orf112Q9NSG2 853 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 STK24Q9Y6E0 443 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 MICAL3Q7RTP6 2002 aa17.64■□□□□ 0.41
TSPAN4-201ENST00000346501 SZT2Q5T011 3432 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 LAMA3Q16787 3333 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 ZSCAN20P17040 1043 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 PDCP20941 246 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 TAP1Q03518 808 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 CTTNQ14247 550 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 XKR9Q5GH70 373 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 LARP1BQ659C4 914 aaKnown RBP17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 ANO5Q75V66 913 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 TCP11Q8WWU5 503 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 SAMD11Q96NU1 681 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 MTMR9Q96QG7 549 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 GCOM2Q9BZD3 368 aaPredicted RBP17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 OSBPL7Q9BZF2 842 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 RGL1Q9NZL6 768 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 EVPLQ92817 2033 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 MYO9BQ13459 2157 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 GBF1Q92538 1859 aa17.63■□□□□ 0.41
TSPAN4-201ENST00000346501 LAD1O00515 517 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 CD2BP2O95400 341 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 EIF4BP23588 611 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 HTRA4P83105 476 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 SPIRE1Q08AE8 756 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 MKRN4PQ13434 485 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 RILPL1Q5EBL4 403 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 HAUS3Q68CZ6 603 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 PLA2G4FQ68DD2 849 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 NPAS4Q8IUM7 802 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 TSPYL2Q9H2G4 693 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 CERS4Q9HA82 394 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 SUCLA2Q9P2R7 463 aaPredicted RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 ST3GAL5Q9UNP4 418 aa17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 NOC2LQ9Y3T9 749 aaKnown RBP17.62■□□□□ 0.41
TSPAN4-201ENST00000346501 WDR81Q562E7 1941 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 GPR32O75388 356 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 TECP42680 631 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 GPC3P51654 580 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 ZNF410Q86VK4 478 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 RHPN2Q8IUC4 686 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 FIBCD1Q8N539 461 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 LINC01465Q8N7H1 131 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 SLC17A8Q8NDX2 589 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 PSPC1Q8WXF1 523 aaKnown RBP17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 SH2D3AQ9BRG2 576 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 CDHR5Q9HBB8 845 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 ERVK-5Q9HDB9 667 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 TUFT1Q9NNX1 390 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 ANKEF1Q9NU02 776 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 RWDD3Q9Y3V2 267 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 PCDHB7Q9Y5E2 793 aa17.61■□□□□ 0.41
TSPAN4-201ENST00000346501 IGKV6-21A0A0C4DH24 114 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 LINC01553A4QN01 128 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 TMEM150BA6NC51 233 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 POTEMA6NI47 508 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 ASAP2O43150 1006 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 SLITRK3O94933 977 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 STBD1O95210 358 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 LYPLA2O95372 231 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 XRCC6P12956 609 aaKnown RBP eCLIP17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 IBSPP21815 317 aaPredicted RBP17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 SFPQP23246 707 aaKnown RBP eCLIP17.6■□□□□ 0.412e-6■■■■□ 23.9
TSPAN4-201ENST00000346501 NPEPPSP55786 919 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 ERVK-21P61565 698 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 SLC24A5Q71RS6 500 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 MTRQ99707 1265 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 ADAM2Q99965 735 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 HSD17B14Q9BPX1 270 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 TMEM60Q9H2L4 133 aa17.6■□□□□ 0.41
TSPAN4-201ENST00000346501 LCHNA4D1U4 455 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 WNT7AO00755 349 aa17.59■□□□□ 0.41
TSPAN4-201ENST00000346501 DARSP14868 501 aaKnown RBP17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms