RNA–Protein interactions for RNA: ENST00000346213.8

RAB5C-201, Transcript of RAB5C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB5C, Length 1,671 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-201ENST00000346213 KDM3AQ9Y4C1 1321 aa18.07■□□□□ 0.48
RAB5C-201ENST00000346213 PDIA4P13667 645 aaKnown RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 GCFC2P16383 781 aaKnown RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 NPEPPSP55786 919 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 MAFAQ8NHW3 353 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 TOP1MTQ969P6 601 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 OSMRQ99650 979 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 ADAMTS10Q9H324 1103 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 ERVK-5Q9HDB9 667 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 KAT6AQ92794 2004 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 A0A087WWV3 80 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 ENPP3O14638 875 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 TRAK2O60296 914 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 UPP2O95045 317 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 ATP2B1P20020 1258 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 GJB2P29033 226 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 TOB1P50616 345 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 MTERF2Q49AM1 385 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 FAM228AQ86W67 206 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 SP7Q8TDD2 431 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 DYDC2Q96IM9 177 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 FAM20AQ96MK3 541 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 SEPT9Q9UHD8 586 aaPredicted RBP18.06■□□□□ 0.48
RAB5C-201ENST00000346213 GINS2Q9Y248 185 aa18.06■□□□□ 0.48
RAB5C-201ENST00000346213 LOXHD1Q8IVV2 1947 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 IGKV6-21A0A0C4DH24 114 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 CSDE1O75534 798 aaKnown RBP18.05■□□□□ 0.48
RAB5C-201ENST00000346213 GATMP50440 423 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 CYP4A11Q02928 519 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 SKOR2Q2VWA4 1001 aaPredicted RBP18.05■□□□□ 0.48
RAB5C-201ENST00000346213 NCAPH2Q6IBW4 605 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 EFCAB12Q6NXP0 572 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 METTL13Q8N6R0 699 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 RDM1Q8NG50 284 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 ARNTL2Q8WYA1 636 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 C17orf80Q9BSJ5 609 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 NIFKQ9BYG3 293 aaKnown RBP18.05■□□□□ 0.48
RAB5C-201ENST00000346213 MTUS1Q9ULD2 1270 aa18.05■□□□□ 0.48
RAB5C-201ENST00000346213 POTEMA6NI47 508 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 TBX3O15119 743 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 FGFR4P22455 802 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 CTTNQ14247 550 aaKnown RBP18.04■□□□□ 0.48
RAB5C-201ENST00000346213 GSE1Q14687 1217 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 RSPH3Q86UC2 560 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 GDPD5Q8WTR4 605 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 RAD9AQ99638 391 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 BMP2KQ9NSY1 1161 aaPredicted RBP18.04■□□□□ 0.48
RAB5C-201ENST00000346213 TCEAL9Q9UHQ7 104 aa18.04■□□□□ 0.48
RAB5C-201ENST00000346213 EVPLQ92817 2033 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 MYH9P35579 1960 aaKnown RBP18.03■□□□□ 0.48
RAB5C-201ENST00000346213 STX6O43752 255 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 AMHP03971 560 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 SYT1P21579 422 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 MCM7P33993 719 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 IER5Q5VY09 327 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 C4orf32Q8N8J7 132 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 FAM167AQ96KS9 214 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 LXNQ9BS40 222 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 NEMFO60524 1076 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 TRIM29Q14134 588 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 ZNF174Q15697 407 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 CALCRLQ16602 461 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 XKR3Q5GH77 459 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 MCTP1Q6DN14 999 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 KSR1Q8IVT5 923 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 APBB2Q92870 758 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 ZBED2Q9BTP6 218 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 SUGCTQ9HAC7 445 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 BRMS1Q9HCU9 246 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 HCSTQ9UBK5 93 aa18.03■□□□□ 0.48
RAB5C-201ENST00000346213 EFCAB14O75071 495 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 SLITRK3O94933 977 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 ZSCAN22P10073 491 aaPredicted RBP18.02■□□□□ 0.47
RAB5C-201ENST00000346213 GPC3P51654 580 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 NLRP11P59045 1033 aaKnown RBP18.02■□□□□ 0.47
RAB5C-201ENST00000346213 PSMC5P62195 406 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 HMGN5P82970 282 aaKnown RBP18.02■□□□□ 0.47
RAB5C-201ENST00000346213 GRB10Q13322 594 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 EPHA7Q15375 998 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 NOSTRINQ8IVI9 506 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 NME8Q8N427 588 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 HSD17B14Q9BPX1 270 aa18.02■□□□□ 0.47
RAB5C-201ENST00000346213 EIF2AK1Q9BQI3 630 aaKnown RBP18.02■□□□□ 0.47
RAB5C-201ENST00000346213 FOXP1Q9H334 677 aaPredicted RBP18.02■□□□□ 0.47
RAB5C-201ENST00000346213 PDCP20941 246 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 U2AF2P26368 475 aaKnown RBP eCLIP18.01■□□□□ 0.47
RAB5C-201ENST00000346213 TXKP42681 527 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 QARSP47897 775 aaKnown RBP18.01■□□□□ 0.47
RAB5C-201ENST00000346213 DSC3Q14574 896 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 PPM1EQ8WY54 764 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 ZNF689Q96CS4 500 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-201ENST00000346213 TSPYL2Q9H2G4 693 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-201ENST00000346213 TTC12Q9H892 705 aaPredicted RBP18.01■□□□□ 0.47
RAB5C-201ENST00000346213 ST3GAL5Q9UNP4 418 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 AKT3Q9Y243 479 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 MTCH2Q9Y6C9 303 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 SQORQ9Y6N5 450 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 MUC3AQ02505 3323 aa18.01■□□□□ 0.47
RAB5C-201ENST00000346213 SPATA31C1P0DKV0 1188 aa18■□□□□ 0.47
RAB5C-201ENST00000346213 ERVK-21P61565 698 aa18■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms